Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC090574.1-201ENST00000623186 233 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 AC138305.3-201ENST00000624988 240 ntBASIC2.31□□□□□ -2.04
CCDC38Q502W7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CCDC38Q502W7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC38Q502W7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC38Q502W7 Y_RNA.5-201ENST00000362334 102 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 RNY3P11-201ENST00000364153 102 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 Y_RNA.535-201ENST00000384612 99 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 SNORA48.1-201ENST00000390879 135 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 AL442163.3-201ENST00000554110 156 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 AC091544.4-201ENST00000555268 342 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC38Q502W7 MIR4448-201ENST00000584360 86 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 AC022513.1-201ENST00000624512 117 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 CTSLP2-204ENST00000629029 392 ntBASIC2.3□□□□□ -2.04
CCDC38Q502W7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CCDC38Q502W7 RNA5SP276-201ENST00000362580 94 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 RNU1-115P-201ENST00000365329 160 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 MIR628-201ENST00000385229 95 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 AL158823.1-201ENST00000418441 478 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 AC008134.1-201ENST00000420943 193 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 AC018865.2-201ENST00000423631 129 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 RPL23AP3-201ENST00000453844 468 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC38Q502W7 HMGN1P13-201ENST00000505795 138 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 AC011406.1-201ENST00000512440 370 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 Y_RNA.661-201ENST00000516003 99 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 RNA5SP281-201ENST00000516504 135 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 RNU6-107P-201ENST00000516643 102 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC38Q502W7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC38Q502W7 AL353149.1-201ENST00000610667 244 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 AL357075.2-201ENST00000614906 189 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 AL160413.1-201ENST00000622780 310 ntBASIC2.29□□□□□ -2.04
CCDC38Q502W7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC38Q502W7 Y_RNA.395-201ENST00000383945 109 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 RNY3P4-201ENST00000384428 101 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 Y_RNA.496-201ENST00000384444 101 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 SNORD12B-201ENST00000410433 91 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 ELOCP21-201ENST00000412558 336 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 TOMM22P2-201ENST00000430735 237 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 AC025647.1-201ENST00000517879 253 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 MIR4287-201ENST00000579398 78 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 VN1R91P-201ENST00000594377 169 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 AC090971.5-201ENST00000621102 293 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 uc_338.20-201ENST00000621563 178 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 AC006001.4-201ENST00000622243 395 ntBASIC2.28□□□□□ -2.04
CCDC38Q502W7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC38Q502W7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC38Q502W7 AC245060.5-201ENST00000610778 3293 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 MTND4P29-201ENST00000503122 1372 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 Y_RNA.112-201ENST00000363250 102 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 RNA5SP138-201ENST00000365098 114 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 SNORD42.2-201ENST00000365570 69 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC38Q502W7 RPS20P15-201ENST00000412792 311 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC38Q502W7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 RNA5SP364-201ENST00000516938 78 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 AC018448.1-201ENST00000552843 316 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC38Q502W7 AC092447.9-201ENST00000603395 144 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.15-201ENST00000611544 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.16-201ENST00000613119 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.12-201ENST00000613778 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.20-201ENST00000613956 192 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.9-201ENST00000615427 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.11-201ENST00000616345 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.2-201ENST00000616535 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.3-201ENST00000617785 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 AL138825.1-201ENST00000618587 192 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.19-201ENST00000618602 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 RNU2-1-201ENST00000618664 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.6-201ENST00000619225 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.5-201ENST00000619465 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 U2.10-201ENST00000620268 191 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 AL162373.1-201ENST00000620433 407 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 AC009831.4-201ENST00000620744 325 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 MIR4272-201ENST00000635924 64 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.27□□□□□ -2.05
CCDC38Q502W7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 XGY1-201ENST00000381172 446 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 Y_RNA.498-201ENST00000384460 102 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 SNORA67.4-201ENST00000384688 142 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 SNORA11.4-201ENST00000408823 129 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 MTCO3P19-201ENST00000415864 321 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 AC096644.2-201ENST00000429278 159 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 CHEK2P4-201ENST00000450340 246 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 SNORA40.9-201ENST00000515895 93 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 RNVU1-2-201ENST00000516326 135 ntBASIC2.26□□□□□ -2.05
CCDC38Q502W7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms