Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 RPS29P13-201ENST00000402041 169 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 RNU4-46P-201ENST00000410818 138 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 USP9YP11-201ENST00000427537 717 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 HMGN2P22-201ENST00000427588 175 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 AC005534.2-201ENST00000431047 433 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 AL117351.1-201ENST00000438864 766 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 RNU7-56P-201ENST00000458744 62 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 RNU7-165P-201ENST00000458864 60 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 RNU7-159P-201ENST00000459284 62 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 RNU6-221P-201ENST00000459541 99 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 AC091965.4-201ENST00000607691 587 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 AL109933.3-201ENST00000619095 188 ntBASIC-0.75□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 RNU6-25P-201ENST00000383873 107 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 RNU6-48P-201ENST00000384161 107 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 RNU6-15P-201ENST00000384534 107 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 RNU6-29P-201ENST00000384637 107 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 RNA5SP300-201ENST00000391197 107 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 Z99497.1-201ENST00000421282 135 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 AC009237.7-201ENST00000447357 229 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 AC011921.3-201ENST00000605540 361 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 SNORA43.4-201ENST00000629559 138 ntBASIC-0.76□□□□□ -2.53
CCDC58Q4VC31 MIRLET7C-201ENST00000362160 84 ntBASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 MIR892B-201ENST00000401279 77 ntBASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 CALM2P2-201ENST00000428512 440 ntBASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 AL392103.1-201ENST00000447000 198 ntBASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 RNU6-977P-201ENST00000516411 103 ntBASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 AP001372.4-201ENST00000524889 472 ntBASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.77□□□□□ -2.53
CCDC58Q4VC31 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.78□□□□□ -2.53
CCDC58Q4VC31 MTND4LP11-201ENST00000422184 280 ntBASIC-0.78□□□□□ -2.53
CCDC58Q4VC31 AC093027.1-201ENST00000546698 429 ntBASIC-0.78□□□□□ -2.53
CCDC58Q4VC31 MIR544B-201ENST00000582372 78 ntBASIC-0.78□□□□□ -2.53
CCDC58Q4VC31 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.78□□□□□ -2.53
CCDC58Q4VC31 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.79□□□□□ -2.54
CCDC58Q4VC31 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.79□□□□□ -2.54
CCDC58Q4VC31 SNORA40.2-201ENST00000390847 128 ntBASIC-0.79□□□□□ -2.54
CCDC58Q4VC31 RNU6-269P-201ENST00000391077 97 ntBASIC-0.79□□□□□ -2.54
CCDC58Q4VC31 RNU6-613P-201ENST00000410412 108 ntBASIC-0.79□□□□□ -2.54
CCDC58Q4VC31 AC023050.3-201ENST00000541142 333 ntBASIC-0.79□□□□□ -2.54
CCDC58Q4VC31 AC068790.2-201ENST00000602601 557 ntBASIC-0.79□□□□□ -2.54
CCDC58Q4VC31 AL008636.1-201ENST00000625038 1018 ntBASIC-0.79□□□□□ -2.54
CCDC58Q4VC31 MIR520C-201ENST00000385005 87 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 RNA5SP95-201ENST00000410319 137 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 RNU6-284P-201ENST00000411105 106 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC091021.1-201ENST00000468051 388 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC107401.1-201ENST00000503426 685 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC026782.1-201ENST00000512952 449 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC027288.2-201ENST00000553028 243 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AL355073.2-201ENST00000612106 557 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC240442.1-201ENST00000616055 283 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC068792.1-201ENST00000621354 417 ntBASIC-0.8□□□□□ -2.54
CCDC58Q4VC31 AC005592.1-201ENST00000566527 1640 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 RNU6-925P-201ENST00000384629 104 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 AC004866.1-201ENST00000411748 78 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 RPS29P8-201ENST00000445109 171 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 RNU4-49P-201ENST00000516080 140 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 AC087894.1-201ENST00000538359 518 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 BNIP3P26-201ENST00000600827 554 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 MIR3666-201ENST00000607845 111 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 AL078596.1-201ENST00000624856 447 ntBASIC-0.81□□□□□ -2.54
CCDC58Q4VC31 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 RNU6-609P-201ENST00000365459 107 ntBASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 MIR891A-201ENST00000401237 79 ntBASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 RNU2-56P-201ENST00000516826 190 ntBASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 AC072039.2-201ENST00000608883 439 ntBASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 AL591926.4-201ENST00000616895 298 ntBASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 AC008873.1-201ENST00000625051 138 ntBASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.82□□□□□ -2.54
CCDC58Q4VC31 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.83□□□□□ -2.54
CCDC58Q4VC31 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms