Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AL133215.3-201ENST00000609801 448 ntBASIC0.68□□□□□ -2.3
SSX1Q16384 FAM157A-202ENST00000615155 405 ntBASIC0.68□□□□□ -2.3
SSX1Q16384 AL158063.1-201ENST00000615349 536 ntBASIC0.68□□□□□ -2.3
SSX1Q16384 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.68□□□□□ -2.3
SSX1Q16384 AC073349.3-201ENST00000617616 186 ntBASIC0.68□□□□□ -2.3
SSX1Q16384 AC018630.2-201ENST00000534866 2403 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SSX1Q16384 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SSX1Q16384 SNORD87-201ENST00000364849 89 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 Y_RNA.363-201ENST00000365529 113 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 RNU6-1080P-201ENST00000383982 107 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 RNU6-933P-201ENST00000384424 107 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 MIR653-201ENST00000385279 96 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 SNORD12-201ENST00000391002 90 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 EIF4E2P1-201ENST00000393781 255 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC114482.1-201ENST00000418010 247 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC063976.4-201ENST00000421971 163 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.67□□□□□ -2.3
SSX1Q16384 MTCO1P20-201ENST00000425366 358 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC002429.1-201ENST00000437672 148 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC245047.7-201ENST00000440265 293 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 MTND3P16-201ENST00000452205 344 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC079354.2-201ENST00000453523 154 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 RNU6-956P-201ENST00000458868 103 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 RNU6-261P-201ENST00000459506 102 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 SNORD124-201ENST00000459577 104 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC083798.1-201ENST00000472671 131 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.67□□□□□ -2.3
SSX1Q16384 RNA5SP168-201ENST00000516642 112 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC104383.1-201ENST00000530297 370 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AL162424.1-201ENST00000602325 221 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC211469.2-201ENST00000605461 205 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 AC073534.2-201ENST00000620377 381 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
SSX1Q16384 U3.8-201ENST00000363675 217 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 SNORD113-7-201ENST00000363762 77 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 SNORD41-201ENST00000386967 70 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SSX1Q16384 RNU4-55P-201ENST00000410731 137 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.66□□□□□ -2.3
SSX1Q16384 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 AC004941.2-201ENST00000427009 228 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.66□□□□□ -2.3
SSX1Q16384 RNU7-94P-201ENST00000459576 63 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 COX6CP14-201ENST00000469580 174 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 AC091133.4-201ENST00000511142 308 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 RN7SKP298-201ENST00000515950 94 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 SNORD79.1-201ENST00000516069 84 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 SNORA25.14-201ENST00000516481 132 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 RNU6-58P-201ENST00000517143 103 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.66□□□□□ -2.3
SSX1Q16384 AL359821.1-201ENST00000605519 182 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 AC108706.1-201ENST00000611053 297 ntBASIC0.66□□□□□ -2.3
SSX1Q16384 Y_RNA.124-201ENST00000363339 93 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 SNORD114-24-201ENST00000365029 72 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 SNORA69-201ENST00000383895 132 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 MIR32-201ENST00000384965 70 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 MIR514A2-201ENST00000385131 88 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 MIR514A3-201ENST00000385132 88 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 FGF7P8-201ENST00000402994 292 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 AL590002.1-201ENST00000406554 418 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.65□□□□□ -2.31
SSX1Q16384 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.65□□□□□ -2.31
SSX1Q16384 Z82188.1-201ENST00000436709 154 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 RPS4XP11-201ENST00000446897 772 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 RNU6-113P-201ENST00000516653 101 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 RNU6-1198P-201ENST00000516904 67 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.65□□□□□ -2.31
SSX1Q16384 AC026371.1-201ENST00000551867 419 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 MIR4778-201ENST00000577635 80 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 AC080078.2-201ENST00000603766 501 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 AC121247.2-201ENST00000604776 136 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.65□□□□□ -2.31
SSX1Q16384 AC091895.1-201ENST00000624494 256 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 AC121333.1-201ENST00000567488 2709 ntBASIC0.65□□□□□ -2.31
SSX1Q16384 AP000568.1-201ENST00000282964 442 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 RNU6-199P-201ENST00000362954 107 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 RNY1P10-201ENST00000363268 113 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 Y_RNA.140-201ENST00000363474 103 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 RNA5SP99-201ENST00000364020 114 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 SNORD115-32-201ENST00000364079 82 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 RNU4-9P-201ENST00000364951 139 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 AF228730.1-201ENST00000397972 663 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 AC092447.3-201ENST00000426027 686 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 AL353572.1-201ENST00000442490 417 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.64□□□□□ -2.31
SSX1Q16384 RNU7-187P-201ENST00000458985 68 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 AL590705.4-201ENST00000532209 134 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 AC090049.2-201ENST00000550377 109 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.64□□□□□ -2.31
SSX1Q16384 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.64□□□□□ -2.31
SSX1Q16384 AL158209.2-201ENST00000619266 216 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 AC006504.8-201ENST00000621046 635 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 Z69908.1-201ENST00000622603 247 ntBASIC0.64□□□□□ -2.31
SSX1Q16384 MTND4P12-201ENST00000498999 1377 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms