Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AC005668.1-201ENST00000571142 476 ntBASIC1.34□□□□□ -2.19
SF3A2Q15428 AC100830.2-201ENST00000581636 240 ntBASIC1.34□□□□□ -2.19
SF3A2Q15428 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.34□□□□□ -2.19
SF3A2Q15428 VN1R107P-201ENST00000601784 209 ntBASIC1.34□□□□□ -2.19
SF3A2Q15428 Y_RNA.804-201ENST00000615262 101 ntBASIC1.34□□□□□ -2.19
SF3A2Q15428 TPTEP1-208ENST00000636884 213 ntBASIC1.34□□□□□ -2.19
SF3A2Q15428 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SF3A2Q15428 RNU1-62P-201ENST00000362599 164 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 RNU6-1317P-201ENST00000364582 104 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 Y_RNA.374-201ENST00000365606 101 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 RNU6-1009P-201ENST00000390996 107 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.33□□□□□ -2.2
SF3A2Q15428 AC078809.1-201ENST00000427601 140 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.33□□□□□ -2.2
SF3A2Q15428 MTND1P11-201ENST00000456661 876 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 AC004223.1-201ENST00000479840 271 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 AC114801.2-201ENST00000503825 781 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 AC025465.3-201ENST00000510570 311 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 RNA5SP454-201ENST00000517231 127 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.33□□□□□ -2.2
SF3A2Q15428 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.33□□□□□ -2.2
SF3A2Q15428 AC021231.3-201ENST00000558497 370 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 MIR4790-201ENST00000577799 79 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 MIR3923-201ENST00000579521 83 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 Z98751.3-201ENST00000604447 521 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.33□□□□□ -2.2
SF3A2Q15428 AC025253.1-201ENST00000613623 543 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
SF3A2Q15428 AC009541.1-201ENST00000438279 2662 ntBASIC1.33□□□□□ -2.2
SF3A2Q15428 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU6-438P-201ENST00000365561 103 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU6-296P-201ENST00000384608 107 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU6-95P-201ENST00000384697 107 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU6-1106P-201ENST00000390845 107 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 SNORA26.3-201ENST00000391119 136 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 MIR548K-201ENST00000408406 116 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 RPL23AP95-201ENST00000426806 265 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 AL133396.1-201ENST00000432048 687 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 AC093019.1-201ENST00000443135 252 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.32□□□□□ -2.2
SF3A2Q15428 MTND1P17-201ENST00000448961 204 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.32□□□□□ -2.2
SF3A2Q15428 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU7-187P-201ENST00000458985 68 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU6-1037P-201ENST00000459571 107 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 AC087477.1-201ENST00000465747 340 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 MTND5P5-201ENST00000503764 376 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 Y_RNA.691-201ENST00000516611 103 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 RNU6-612P-201ENST00000516909 102 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 AC105029.1-201ENST00000520250 669 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.32□□□□□ -2.2
SF3A2Q15428 LARP7P1-201ENST00000605576 316 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 PCGEM1.1-201ENST00000613431 131 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.32□□□□□ -2.2
SF3A2Q15428 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 AC068205.3-201ENST00000636385 468 ntBASIC1.32□□□□□ -2.2
SF3A2Q15428 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SF3A2Q15428 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
SF3A2Q15428 MTND5P9-201ENST00000503854 1755 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SF3A2Q15428 AL161722.3-201ENST00000605789 2983 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 AC092268.1-201ENST00000342691 405 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 U3.9-201ENST00000363823 204 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 Y_RNA.263-201ENST00000364659 114 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 Y_RNA.339-201ENST00000365325 102 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 Y_RNA.356-201ENST00000365475 113 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 Y_RNA.529-201ENST00000384586 119 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 MIR208B-201ENST00000401172 77 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 MIR548F5-201ENST00000408421 86 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 AC074085.1-201ENST00000413598 418 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 AL139396.1-201ENST00000421137 167 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SF3A2Q15428 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.31□□□□□ -2.2
SF3A2Q15428 AL357134.1-201ENST00000445848 426 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 RPL9P9-202ENST00000466501 579 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 MTND4P17-201ENST00000470444 350 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 MTCO1P29-201ENST00000496868 288 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 AC016632.1-201ENST00000503994 196 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.31□□□□□ -2.2
SF3A2Q15428 RNA5SP436-201ENST00000516020 115 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 RNU6-1098P-201ENST00000516772 96 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 MRPS36P4-201ENST00000534436 298 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.31□□□□□ -2.2
SF3A2Q15428 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 AL132765.2-201ENST00000610812 351 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.31□□□□□ -2.2
SF3A2Q15428 MIR6767-201ENST00000637302 66 ntBASIC1.31□□□□□ -2.2
SF3A2Q15428 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.31□□□□□ -2.2
SF3A2Q15428 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SF3A2Q15428 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SF3A2Q15428 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SF3A2Q15428 Y_RNA.151-201ENST00000363566 112 ntBASIC1.3□□□□□ -2.2
SF3A2Q15428 RNU6-306P-201ENST00000384617 107 ntBASIC1.3□□□□□ -2.2
SF3A2Q15428 RNU6-1093P-201ENST00000391194 107 ntBASIC1.3□□□□□ -2.2
SF3A2Q15428 RNU6-325P-201ENST00000411132 105 ntBASIC1.3□□□□□ -2.2
SF3A2Q15428 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.3□□□□□ -2.2
SF3A2Q15428 RPS3AP52-201ENST00000435639 297 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms