Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MTND3P8-201ENST00000412909 339 ntBASIC1.57□□□□□ -2.16
SCN1BQ07699 AL161935.2-201ENST00000414627 60 ntBASIC1.57□□□□□ -2.16
SCN1BQ07699 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.57□□□□□ -2.16
SCN1BQ07699 AC005002.2-201ENST00000438228 269 ntBASIC1.57□□□□□ -2.16
SCN1BQ07699 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.57□□□□□ -2.16
SCN1BQ07699 RPS26P55-201ENST00000471178 356 ntBASIC1.57□□□□□ -2.16
SCN1BQ07699 AC091544.4-201ENST00000555268 342 ntBASIC1.57□□□□□ -2.16
SCN1BQ07699 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SCN1BQ07699 RNU6-1266P-201ENST00000362794 105 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 Y_RNA.106-201ENST00000363189 100 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.56□□□□□ -2.16
SCN1BQ07699 Y_RNA.594-201ENST00000410373 140 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.56□□□□□ -2.16
SCN1BQ07699 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.56□□□□□ -2.16
SCN1BQ07699 AC018710.1-201ENST00000506509 158 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 RNA5SP445-201ENST00000515889 115 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 RNU1-142P-201ENST00000516682 145 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 AC019176.1-201ENST00000518519 225 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.56□□□□□ -2.16
SCN1BQ07699 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.56□□□□□ -2.16
SCN1BQ07699 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.56□□□□□ -2.16
SCN1BQ07699 MIR4648-201ENST00000580107 72 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 AC005014.2-201ENST00000607795 599 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 AL359075.3-201ENST00000613288 217 ntBASIC1.56□□□□□ -2.16
SCN1BQ07699 MTND5P35-201ENST00000557537 1720 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 Y_RNA.2-201ENST00000362330 96 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 SNORD1A-201ENST00000364968 72 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 RNU6-192P-201ENST00000391253 100 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 RNU1-139P-201ENST00000391307 165 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 RPL21P1-201ENST00000399532 476 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 MRPL35P1-201ENST00000404272 572 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 RNU6-1186P-201ENST00000410429 97 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 AC074085.1-201ENST00000413598 418 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 AL353997.1-201ENST00000432936 108 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 AC003989.2-201ENST00000440224 169 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 AL606517.2-201ENST00000442855 241 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 AC010095.1-201ENST00000443543 144 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 Y_RNA.683-201ENST00000516508 93 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 RNU6-358P-201ENST00000516564 75 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 RNU6-107P-201ENST00000516643 102 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 AC091144.1-201ENST00000519573 138 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.55□□□□□ -2.16
SCN1BQ07699 AC093023.1-201ENST00000547375 507 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 FRG2DP-202ENST00000566967 323 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.55□□□□□ -2.16
SCN1BQ07699 AC022432.1-201ENST00000595739 310 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 U6.108-201ENST00000637764 58 ntBASIC1.55□□□□□ -2.16
SCN1BQ07699 MTND5P16-201ENST00000460269 1703 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
SCN1BQ07699 Y_RNA.184-201ENST00000363884 108 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 SNORA40.18-201ENST00000391200 128 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 RNU6-1050P-201ENST00000410388 107 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.54□□□□□ -2.16
SCN1BQ07699 MTND4P18-201ENST00000447010 465 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 AC107399.1-201ENST00000451226 265 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 Y_RNA.670-201ENST00000516255 105 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 AC015688.6-201ENST00000577737 104 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 AC011712.1-201ENST00000588959 234 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 AC005858.4-201ENST00000623191 700 ntBASIC1.54□□□□□ -2.16
SCN1BQ07699 RNU6-593P-201ENST00000364716 112 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 RNU6-281P-201ENST00000384212 103 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 RNU6-601P-201ENST00000384540 107 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SCN1BQ07699 SNORA11.2-201ENST00000408318 127 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 RNU6-1001P-201ENST00000411265 100 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 AC245517.4-201ENST00000448601 281 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 RPS27P1-201ENST00000450552 247 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 RPS26P45-201ENST00000471748 340 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 AC079140.2-201ENST00000506193 142 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 AC107393.1-201ENST00000512403 346 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 Y_RNA.708-201ENST00000516950 96 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 AC027419.1-201ENST00000522976 328 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 AL137100.2-201ENST00000555786 315 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 MIR5701-3-201ENST00000578890 82 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 MIR3937-201ENST00000580135 106 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.53□□□□□ -2.16
SCN1BQ07699 MIR5701-1-201ENST00000585138 82 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 AL929325.1-201ENST00000603096 117 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 AC009229.3-201ENST00000608056 282 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 MIR5701-2-201ENST00000615634 82 ntBASIC1.53□□□□□ -2.16
SCN1BQ07699 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.52□□□□□ -2.17
SCN1BQ07699 Y_RNA.72-201ENST00000362894 103 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SCN1BQ07699 MIR194-1-201ENST00000384892 85 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 RNU6-700P-201ENST00000391043 107 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 MIR190B-201ENST00000401119 79 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 RPL37P10-201ENST00000412884 288 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 RPS27P16-201ENST00000425758 201 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 AC010154.1-201ENST00000425857 269 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.52□□□□□ -2.17
SCN1BQ07699 RNU7-87P-201ENST00000459343 62 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 RPL7P42-201ENST00000481005 679 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 RPS29P21-201ENST00000496272 170 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 RPL23AP94-201ENST00000512518 302 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 APOOP3-201ENST00000536787 586 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 AC125232.2-201ENST00000592457 143 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 AC022217.4-201ENST00000604389 163 ntBASIC1.52□□□□□ -2.17
SCN1BQ07699 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms