Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MIR802-201ENST00000390235 94 ntBASIC-1.66□□□□□ -2.68
TFF3Q07654 AL365184.2-201ENST00000431139 435 ntBASIC-1.66□□□□□ -2.68
TFF3Q07654 AC005345.1-201ENST00000431868 217 ntBASIC-1.66□□□□□ -2.68
TFF3Q07654 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.66□□□□□ -2.68
TFF3Q07654 AC091135.1-201ENST00000585943 307 ntBASIC-1.66□□□□□ -2.68
TFF3Q07654 AL136221.1-201ENST00000621449 509 ntBASIC-1.66□□□□□ -2.68
TFF3Q07654 AC093726.3-201ENST00000637588 150 ntBASIC-1.66□□□□□ -2.68
TFF3Q07654 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 RNU6-650P-201ENST00000365658 111 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 RNU6-47P-201ENST00000383866 107 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 MTCYBP5-201ENST00000423752 1135 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 MTCO2P23-201ENST00000425216 680 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 AC245047.3-201ENST00000429428 127 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 MTND3P4-201ENST00000453537 303 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 RNU6-504P-201ENST00000516568 104 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 AC064872.1-201ENST00000604823 1072 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 SNORD38B-202ENST00000625943 69 ntBASIC-1.67□□□□□ -2.68
TFF3Q07654 RNU4-15P-201ENST00000362613 141 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
TFF3Q07654 RNU6-754P-201ENST00000391166 107 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 MTCO3P40-201ENST00000392516 676 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 AL133264.1-201ENST00000407157 562 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 HIGD1AP15-201ENST00000416198 280 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.68□□□□□ -2.68
TFF3Q07654 AL355994.1-201ENST00000424379 260 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 HLA-S-202ENST00000425174 53 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.68□□□□□ -2.68
TFF3Q07654 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.68□□□□□ -2.68
TFF3Q07654 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.68□□□□□ -2.68
TFF3Q07654 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.68□□□□□ -2.68
TFF3Q07654 MIR4676-201ENST00000583078 72 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 AC079610.2-201ENST00000604818 690 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-1.68□□□□□ -2.68
TFF3Q07654 AC099654.9-201ENST00000637055 678 ntBASIC-1.68□□□□□ -2.68
TFF3Q07654 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 RNU6-934P-201ENST00000365154 107 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 RNU6-975P-201ENST00000384296 105 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 SNORA40C-201ENST00000391285 128 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 TRIM60P5Y-201ENST00000413946 574 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 AL117339.3-201ENST00000418733 162 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 AL360271.2-201ENST00000447710 161 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 SUMO1P2-201ENST00000452524 304 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 ART2BP-201ENST00000453501 499 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 RNA5SP169-201ENST00000517268 117 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-1.69□□□□□ -2.68
TFF3Q07654 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.69□□□□□ -2.68
TFF3Q07654 AC138749.4-201ENST00000563970 127 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.69□□□□□ -2.68
TFF3Q07654 AL359075.3-201ENST00000613288 217 ntBASIC-1.69□□□□□ -2.68
TFF3Q07654 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.69□□□□□ -2.68
TFF3Q07654 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.7□□□□□ -2.68
TFF3Q07654 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.7□□□□□ -2.68
TFF3Q07654 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.7□□□□□ -2.68
TFF3Q07654 MIR1302-7-201ENST00000408841 72 ntBASIC-1.7□□□□□ -2.68
TFF3Q07654 RNA5SP95-201ENST00000410319 137 ntBASIC-1.7□□□□□ -2.68
TFF3Q07654 AL365338.1-201ENST00000422282 858 ntBASIC-1.7□□□□□ -2.68
TFF3Q07654 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.7□□□□□ -2.68
TFF3Q07654 SNORA31.19-201ENST00000517079 126 ntBASIC-1.7□□□□□ -2.68
TFF3Q07654 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-1.7□□□□□ -2.68
TFF3Q07654 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-1.7□□□□□ -2.68
TFF3Q07654 SNORA28-201ENST00000606769 126 ntBASIC-1.7□□□□□ -2.68
TFF3Q07654 RNU6-580P-201ENST00000365159 107 ntBASIC-1.71□□□□□ -2.68
TFF3Q07654 AL590084.2-201ENST00000401481 382 ntBASIC-1.71□□□□□ -2.68
TFF3Q07654 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-1.71□□□□□ -2.68
TFF3Q07654 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.71□□□□□ -2.68
TFF3Q07654 AC091959.1-201ENST00000495857 238 ntBASIC-1.71□□□□□ -2.68
TFF3Q07654 MTCO3P15-201ENST00000526563 574 ntBASIC-1.71□□□□□ -2.68
TFF3Q07654 LARP7P2-201ENST00000575306 125 ntBASIC-1.71□□□□□ -2.68
TFF3Q07654 U7.6-201ENST00000610841 64 ntBASIC-1.71□□□□□ -2.68
TFF3Q07654 AC091304.10-201ENST00000641554 121 ntBASIC-1.71□□□□□ -2.68
TFF3Q07654 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.72□□□□□ -2.68
TFF3Q07654 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.72□□□□□ -2.68
TFF3Q07654 RNU6-166P-201ENST00000384371 107 ntBASIC-1.72□□□□□ -2.68
TFF3Q07654 MIR876-201ENST00000401147 81 ntBASIC-1.72□□□□□ -2.68
TFF3Q07654 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.72□□□□□ -2.68
TFF3Q07654 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.72□□□□□ -2.68
TFF3Q07654 AL512326.2-201ENST00000426359 151 ntBASIC-1.72□□□□□ -2.68
TFF3Q07654 AC093850.1-201ENST00000454121 251 ntBASIC-1.72□□□□□ -2.68
TFF3Q07654 RNU7-14P-201ENST00000459331 62 ntBASIC-1.72□□□□□ -2.68
TFF3Q07654 RNU7-41P-201ENST00000515917 61 ntBASIC-1.72□□□□□ -2.68
TFF3Q07654 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-1.72□□□□□ -2.68
TFF3Q07654 U6.108-201ENST00000637764 58 ntBASIC-1.72□□□□□ -2.68
TFF3Q07654 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.73□□□□□ -2.69
TFF3Q07654 CDK8P2-201ENST00000415020 547 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 AC109446.1-201ENST00000566172 220 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 AC095057.3-201ENST00000567102 1157 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 MIR4771-2-201ENST00000577758 74 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 MIR378D2-201ENST00000580636 98 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 MIR4771-1-201ENST00000582617 74 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 MIR4677-201ENST00000584153 80 ntBASIC-1.73□□□□□ -2.69
TFF3Q07654 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms