Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.52□□□□□ -2.17
UBXN1Q04323 snoU13.15-201ENST00000459407 104 ntBASIC1.52□□□□□ -2.17
UBXN1Q04323 RPL30P10-201ENST00000488148 337 ntBASIC1.52□□□□□ -2.17
UBXN1Q04323 AC018710.1-201ENST00000506509 158 ntBASIC1.52□□□□□ -2.17
UBXN1Q04323 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.52□□□□□ -2.17
UBXN1Q04323 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.52□□□□□ -2.17
UBXN1Q04323 AL645939.4-201ENST00000604495 135 ntBASIC1.52□□□□□ -2.17
UBXN1Q04323 AL078596.1-201ENST00000624856 447 ntBASIC1.52□□□□□ -2.17
UBXN1Q04323 MTND5P35-201ENST00000557537 1720 ntBASIC1.52□□□□□ -2.17
UBXN1Q04323 SNORA33-201ENST00000363664 130 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 SNORD115-32-201ENST00000364079 82 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 RNU6-596P-201ENST00000365395 98 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 MIR194-1-201ENST00000384892 85 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 MIR23A-201ENST00000385245 73 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 RNU6-510P-201ENST00000391239 108 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 MTND3P8-201ENST00000412909 339 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 AC243428.1-201ENST00000421099 264 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 SDAD1P3-201ENST00000427380 333 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 AL135790.2-201ENST00000437701 267 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.51□□□□□ -2.17
UBXN1Q04323 RNU1-54P-201ENST00000517181 120 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 AC005668.1-201ENST00000571142 476 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
UBXN1Q04323 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.51□□□□□ -2.17
UBXN1Q04323 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBXN1Q04323 SNORD115-8-201ENST00000363856 82 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 Y_RNA.248-201ENST00000364501 109 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 SNORD115-38-201ENST00000365037 82 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 Y_RNA.473-201ENST00000384333 102 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 RNU6-1065P-201ENST00000384513 106 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 MIR1253-201ENST00000408273 105 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 MIR548K-201ENST00000408406 116 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 RNU6-57P-201ENST00000411348 103 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 AL445305.1-201ENST00000432577 575 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 SNORD5.1-201ENST00000458800 75 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 RNU6-344P-201ENST00000516635 111 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 RNU6-58P-201ENST00000517143 103 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.5□□□□□ -2.17
UBXN1Q04323 AC027288.2-201ENST00000553028 243 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 AL078604.3-201ENST00000615580 211 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 U6atac.1-201ENST00000616025 117 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 AC005858.4-201ENST00000623191 700 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBXN1Q04323 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
UBXN1Q04323 Y_RNA.48-201ENST00000362710 103 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 Y_RNA.319-201ENST00000365138 92 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 SNORA4.2-201ENST00000365313 147 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 SNORA67.2-201ENST00000384300 149 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 MIR548F5-201ENST00000408421 86 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 AL139396.1-201ENST00000421137 167 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.49□□□□□ -2.17
UBXN1Q04323 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.49□□□□□ -2.17
UBXN1Q04323 RNU7-34P-201ENST00000459394 64 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 RNU7-57P-201ENST00000459540 60 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.49□□□□□ -2.17
UBXN1Q04323 AC024995.1-201ENST00000523014 93 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 MIR4273-201ENST00000582824 84 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 AC011712.1-201ENST00000588959 234 ntBASIC1.49□□□□□ -2.17
UBXN1Q04323 CASC19-280ENST00000642102 1351 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 MIR26B-201ENST00000362251 77 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 Y_RNA.72-201ENST00000362894 103 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 RNU6-17P-201ENST00000384245 107 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 RNU6-18P-201ENST00000384527 107 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 RNU6-417P-201ENST00000384712 107 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 MIR153-2-201ENST00000385225 87 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 MIR758-201ENST00000390227 88 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 RNA5SP504-201ENST00000410676 117 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 RPL30P7-201ENST00000479312 323 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 AC026782.1-201ENST00000512952 449 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 AP003033.1-201ENST00000527244 415 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.48□□□□□ -2.17
UBXN1Q04323 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.48□□□□□ -2.17
UBXN1Q04323 snoZ196.1-201ENST00000625269 89 ntBASIC1.48□□□□□ -2.17
UBXN1Q04323 ZNF72P-201ENST00000425869 1908 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 RNU6-595P-201ENST00000363944 107 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 Y_RNA.287-201ENST00000364853 94 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 Y_RNA.339-201ENST00000365325 102 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 RNA5SP323-201ENST00000391094 133 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 AC004965.1-201ENST00000413033 213 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 AC008134.1-201ENST00000420943 193 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 MTND1P2-201ENST00000430604 821 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 RPS3AP52-201ENST00000435639 297 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.47□□□□□ -2.17
UBXN1Q04323 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.47□□□□□ -2.17
UBXN1Q04323 HMGN1P12-201ENST00000499125 195 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 RNA5SP54-201ENST00000516951 92 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 RNU1-117P-201ENST00000517041 158 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 CBX3P8-201ENST00000532412 525 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 UBL5P4-201ENST00000562584 236 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.47□□□□□ -2.17
UBXN1Q04323 AC018462.2-201ENST00000605375 395 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 SNORD11B-201ENST00000607707 90 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
UBXN1Q04323 ZNF299P-201ENST00000406845 1804 ntBASIC1.47□□□□□ -2.17
UBXN1Q04323 RNU6-873P-201ENST00000363833 107 ntBASIC1.46□□□□□ -2.18
UBXN1Q04323 Y_RNA.184-201ENST00000363884 108 ntBASIC1.46□□□□□ -2.18
UBXN1Q04323 Y_RNA.405-201ENST00000383979 100 ntBASIC1.46□□□□□ -2.18
UBXN1Q04323 RNU6-245P-201ENST00000384020 107 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms