Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RNU6-311P-201ENST00000516224 102 ntBASIC0.17□□□□□ -2.38
CCL20P78556 MTND1P5-201ENST00000517906 940 ntBASIC0.17□□□□□ -2.38
CCL20P78556 HIF1AP1-201ENST00000553642 175 ntBASIC0.17□□□□□ -2.38
CCL20P78556 AC122133.1-201ENST00000613964 233 ntBASIC0.17□□□□□ -2.38
CCL20P78556 AC068787.1-201ENST00000623908 691 ntBASIC0.17□□□□□ -2.38
CCL20P78556 OR5AK4P-201ENST00000635912 903 ntBASIC0.17□□□□□ -2.38
CCL20P78556 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CCL20P78556 RNU1-93P-201ENST00000364704 169 ntBASIC0.16□□□□□ -2.38
CCL20P78556 RNU6-793P-201ENST00000384233 104 ntBASIC0.16□□□□□ -2.38
CCL20P78556 RNU6-606P-201ENST00000384721 111 ntBASIC0.16□□□□□ -2.38
CCL20P78556 MIR526A1-201ENST00000384897 85 ntBASIC0.16□□□□□ -2.38
CCL20P78556 MIR450B-201ENST00000401182 78 ntBASIC0.16□□□□□ -2.38
CCL20P78556 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CCL20P78556 RN7SL429P-201ENST00000479090 223 ntBASIC0.16□□□□□ -2.38
CCL20P78556 RN7SL489P-201ENST00000486185 223 ntBASIC0.16□□□□□ -2.38
CCL20P78556 RN7SL327P-201ENST00000488659 223 ntBASIC0.16□□□□□ -2.38
CCL20P78556 RNU7-28P-201ENST00000516759 62 ntBASIC0.16□□□□□ -2.38
CCL20P78556 RNU6-430P-201ENST00000517078 107 ntBASIC0.16□□□□□ -2.38
CCL20P78556 MTND1P35-201ENST00000526739 508 ntBASIC0.16□□□□□ -2.38
CCL20P78556 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CCL20P78556 AP000889.1-201ENST00000530968 660 ntBASIC0.16□□□□□ -2.38
CCL20P78556 AC023157.2-201ENST00000540596 141 ntBASIC0.16□□□□□ -2.38
CCL20P78556 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.16□□□□□ -2.38
CCL20P78556 RNU6-94P-201ENST00000607728 107 ntBASIC0.16□□□□□ -2.38
CCL20P78556 AC087683.2-201ENST00000611384 326 ntBASIC0.16□□□□□ -2.38
CCL20P78556 RN7SL853P-201ENST00000617250 223 ntBASIC0.16□□□□□ -2.38
CCL20P78556 FER-210ENST00000628534 558 ntTSL 5 BASIC0.16□□□□□ -2.38
CCL20P78556 MIR5087-201ENST00000635826 76 ntBASIC0.16□□□□□ -2.38
CCL20P78556 Y_RNA.100-201ENST00000363141 102 ntBASIC0.15□□□□□ -2.39
CCL20P78556 RNU6-245P-201ENST00000384020 107 ntBASIC0.15□□□□□ -2.39
CCL20P78556 RNU6-994P-201ENST00000410507 111 ntBASIC0.15□□□□□ -2.39
CCL20P78556 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.15□□□□□ -2.39
CCL20P78556 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.15□□□□□ -2.39
CCL20P78556 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.15□□□□□ -2.39
CCL20P78556 MRPS10P1-201ENST00000448483 130 ntBASIC0.15□□□□□ -2.39
CCL20P78556 AP000870.1-201ENST00000472927 406 ntBASIC0.15□□□□□ -2.39
CCL20P78556 AC005178.1-201ENST00000508392 440 ntBASIC0.15□□□□□ -2.39
CCL20P78556 AC091133.4-201ENST00000511142 308 ntBASIC0.15□□□□□ -2.39
CCL20P78556 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.15□□□□□ -2.39
CCL20P78556 AP002963.1-201ENST00000530590 184 ntBASIC0.15□□□□□ -2.39
CCL20P78556 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.15□□□□□ -2.39
CCL20P78556 7SK.7-201ENST00000603504 247 ntBASIC0.15□□□□□ -2.39
CCL20P78556 AC064836.2-201ENST00000609491 462 ntBASIC0.15□□□□□ -2.39
CCL20P78556 AC017083.3-201ENST00000609955 700 ntBASIC0.15□□□□□ -2.39
CCL20P78556 AL391834.2-201ENST00000609982 546 ntBASIC0.15□□□□□ -2.39
CCL20P78556 RNU6-137P-201ENST00000363680 108 ntBASIC0.14□□□□□ -2.39
CCL20P78556 RNU6-282P-201ENST00000365357 103 ntBASIC0.14□□□□□ -2.39
CCL20P78556 MIR140-201ENST00000385282 100 ntBASIC0.14□□□□□ -2.39
CCL20P78556 RNU6-903P-201ENST00000391270 109 ntBASIC0.14□□□□□ -2.39
CCL20P78556 RNU2-9P-201ENST00000410194 145 ntBASIC0.14□□□□□ -2.39
CCL20P78556 MRPS18CP6-201ENST00000423587 223 ntBASIC0.14□□□□□ -2.39
CCL20P78556 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.14□□□□□ -2.39
CCL20P78556 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.14□□□□□ -2.39
CCL20P78556 MTND1P8-201ENST00000571424 950 ntBASIC0.14□□□□□ -2.39
CCL20P78556 AC245014.2-201ENST00000603689 287 ntBASIC0.14□□□□□ -2.39
CCL20P78556 AC246785.4-201ENST00000605374 287 ntBASIC0.14□□□□□ -2.39
CCL20P78556 AC092354.1-201ENST00000606057 376 ntBASIC0.14□□□□□ -2.39
CCL20P78556 AC004223.4-201ENST00000612426 332 ntBASIC0.14□□□□□ -2.39
CCL20P78556 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.14□□□□□ -2.39
CCL20P78556 AP001506.1-201ENST00000615444 211 ntBASIC0.14□□□□□ -2.39
CCL20P78556 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.13□□□□□ -2.39
CCL20P78556 AC090625.1-201ENST00000357130 210 ntBASIC0.13□□□□□ -2.39
CCL20P78556 MIRLET7C-201ENST00000362160 84 ntBASIC0.13□□□□□ -2.39
CCL20P78556 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
CCL20P78556 SNORA25.3-201ENST00000363205 127 ntBASIC0.13□□□□□ -2.39
CCL20P78556 Y_RNA.267-201ENST00000364679 109 ntBASIC0.13□□□□□ -2.39
CCL20P78556 RNU6-1297P-201ENST00000384415 104 ntBASIC0.13□□□□□ -2.39
CCL20P78556 RNU6-342P-201ENST00000384521 104 ntBASIC0.13□□□□□ -2.39
CCL20P78556 SNORD105-201ENST00000386910 85 ntBASIC0.13□□□□□ -2.39
CCL20P78556 RNA5SP482-201ENST00000391269 118 ntBASIC0.13□□□□□ -2.39
CCL20P78556 MIR1185-1-201ENST00000408598 86 ntBASIC0.13□□□□□ -2.39
CCL20P78556 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.13□□□□□ -2.39
CCL20P78556 AL593851.1-201ENST00000426171 157 ntBASIC0.13□□□□□ -2.39
CCL20P78556 NDUFB4P10-201ENST00000452541 359 ntBASIC0.13□□□□□ -2.39
CCL20P78556 MTND2P14-201ENST00000482139 351 ntBASIC0.13□□□□□ -2.39
CCL20P78556 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.13□□□□□ -2.39
CCL20P78556 AC010469.2-201ENST00000496412 480 ntBASIC0.13□□□□□ -2.39
CCL20P78556 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.13□□□□□ -2.39
CCL20P78556 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.13□□□□□ -2.39
CCL20P78556 RNA5SP54-201ENST00000516951 92 ntBASIC0.13□□□□□ -2.39
CCL20P78556 AC104576.1-201ENST00000524225 88 ntBASIC0.13□□□□□ -2.39
CCL20P78556 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.13□□□□□ -2.39
CCL20P78556 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.13□□□□□ -2.39
CCL20P78556 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.13□□□□□ -2.39
CCL20P78556 AC243829.6-201ENST00000612652 106 ntBASIC0.13□□□□□ -2.39
CCL20P78556 AC009161.2-201ENST00000624626 138 ntBASIC0.13□□□□□ -2.39
CCL20P78556 AC106754.1-201ENST00000562632 1513 ntBASIC0.13□□□□□ -2.39
CCL20P78556 AL390237.1-201ENST00000404226 1415 ntBASIC0.13□□□□□ -2.39
CCL20P78556 SNORA1B-201ENST00000362535 133 ntBASIC0.12□□□□□ -2.39
CCL20P78556 Y_RNA.336-201ENST00000365307 109 ntBASIC0.12□□□□□ -2.39
CCL20P78556 MIR216A-201ENST00000385063 110 ntBASIC0.12□□□□□ -2.39
CCL20P78556 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
CCL20P78556 RNA5SP219-201ENST00000390940 113 ntBASIC0.12□□□□□ -2.39
CCL20P78556 SNORA40.3-201ENST00000390964 122 ntBASIC0.12□□□□□ -2.39
CCL20P78556 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.12□□□□□ -2.39
CCL20P78556 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.12□□□□□ -2.39
CCL20P78556 AL033528.1-201ENST00000453780 140 ntBASIC0.12□□□□□ -2.39
CCL20P78556 SNORD65B-201ENST00000459126 73 ntBASIC0.12□□□□□ -2.39
CCL20P78556 AC091021.1-201ENST00000468051 388 ntBASIC0.12□□□□□ -2.39
CCL20P78556 SNORA14.1-201ENST00000516113 141 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms