Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.26□□□□□ -2.37
SKP1P63208 MIR3682-201ENST00000581338 84 ntBASIC0.26□□□□□ -2.37
SKP1P63208 AC131055.1-201ENST00000584626 316 ntBASIC0.26□□□□□ -2.37
SKP1P63208 AL136317.1-201ENST00000612653 226 ntBASIC0.26□□□□□ -2.37
SKP1P63208 AC244098.3-201ENST00000424803 96 ntBASIC0.25□□□□□ -2.37
SKP1P63208 CALM2P4-201ENST00000430810 426 ntBASIC0.25□□□□□ -2.37
SKP1P63208 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.25□□□□□ -2.37
SKP1P63208 DAP3P1-201ENST00000441522 278 ntBASIC0.25□□□□□ -2.37
SKP1P63208 MTCO1P19-201ENST00000443487 500 ntBASIC0.25□□□□□ -2.37
SKP1P63208 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.25□□□□□ -2.37
SKP1P63208 SNORA68.3-201ENST00000515906 83 ntBASIC0.25□□□□□ -2.37
SKP1P63208 RNU7-28P-201ENST00000516759 62 ntBASIC0.25□□□□□ -2.37
SKP1P63208 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.25□□□□□ -2.37
SKP1P63208 RN7SL793P-201ENST00000583259 296 ntBASIC0.25□□□□□ -2.37
SKP1P63208 AC234772.3-201ENST00000602277 528 ntBASIC0.25□□□□□ -2.37
SKP1P63208 AC006566.1-201ENST00000608943 513 ntBASIC0.25□□□□□ -2.37
SKP1P63208 SCARNA4-201ENST00000629045 128 ntBASIC0.25□□□□□ -2.37
SKP1P63208 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SKP1P63208 MTND4P4-201ENST00000439033 1366 ntBASIC0.24□□□□□ -2.37
SKP1P63208 RNU6-793P-201ENST00000384233 104 ntBASIC0.24□□□□□ -2.37
SKP1P63208 U8.16-201ENST00000391279 133 ntBASIC0.24□□□□□ -2.37
SKP1P63208 AL008987.1-201ENST00000415528 237 ntBASIC0.24□□□□□ -2.37
SKP1P63208 MTCYBP10-201ENST00000424905 650 ntBASIC0.24□□□□□ -2.37
SKP1P63208 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.24□□□□□ -2.37
SKP1P63208 snoU13.25-201ENST00000458945 104 ntBASIC0.24□□□□□ -2.37
SKP1P63208 OR9P1P-201ENST00000496431 281 ntBASIC0.24□□□□□ -2.37
SKP1P63208 AC109810.1-201ENST00000534066 224 ntBASIC0.24□□□□□ -2.37
SKP1P63208 AC011712.1-201ENST00000588959 234 ntBASIC0.24□□□□□ -2.37
SKP1P63208 MIR98-201ENST00000606724 119 ntBASIC0.24□□□□□ -2.37
SKP1P63208 SEPT14P17-201ENST00000617978 177 ntBASIC0.24□□□□□ -2.37
SKP1P63208 AC007671.2-201ENST00000637344 619 ntBASIC0.24□□□□□ -2.37
SKP1P63208 RNU6-1266P-201ENST00000362794 105 ntBASIC0.23□□□□□ -2.37
SKP1P63208 RNA5SP264-201ENST00000363115 107 ntBASIC0.23□□□□□ -2.37
SKP1P63208 NDUFB4P10-201ENST00000452541 359 ntBASIC0.23□□□□□ -2.37
SKP1P63208 RNU6-1037P-201ENST00000459571 107 ntBASIC0.23□□□□□ -2.37
SKP1P63208 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.23□□□□□ -2.37
SKP1P63208 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.23□□□□□ -2.37
SKP1P63208 RNA5SP454-201ENST00000517231 127 ntBASIC0.23□□□□□ -2.37
SKP1P63208 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SKP1P63208 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.23□□□□□ -2.37
SKP1P63208 AC023827.1-201ENST00000569247 97 ntBASIC0.23□□□□□ -2.37
SKP1P63208 SNORD11B-201ENST00000607707 90 ntBASIC0.23□□□□□ -2.37
SKP1P63208 AC137590.2-201ENST00000619709 240 ntBASIC0.23□□□□□ -2.37
SKP1P63208 PVT1_3.1-201ENST00000620853 95 ntBASIC0.23□□□□□ -2.37
SKP1P63208 AC100810.6-201ENST00000638068 285 ntBASIC0.23□□□□□ -2.37
SKP1P63208 MIRLET7D-201ENST00000362263 87 ntBASIC0.22□□□□□ -2.37
SKP1P63208 Y_RNA.330-201ENST00000365230 109 ntBASIC0.22□□□□□ -2.37
SKP1P63208 Y_RNA.393-201ENST00000383936 102 ntBASIC0.22□□□□□ -2.37
SKP1P63208 RNY1P8-201ENST00000383970 114 ntBASIC0.22□□□□□ -2.37
SKP1P63208 SNORA36.2-201ENST00000384004 127 ntBASIC0.22□□□□□ -2.37
SKP1P63208 RNA5SP222-201ENST00000411039 105 ntBASIC0.22□□□□□ -2.37
SKP1P63208 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.22□□□□□ -2.37
SKP1P63208 AL162725.1-201ENST00000435405 301 ntBASIC0.22□□□□□ -2.37
SKP1P63208 UBE2D3P4-201ENST00000441973 436 ntBASIC0.22□□□□□ -2.37
SKP1P63208 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.22□□□□□ -2.37
SKP1P63208 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.22□□□□□ -2.37
SKP1P63208 RNU7-138P-201ENST00000459479 64 ntBASIC0.22□□□□□ -2.37
SKP1P63208 AC105417.1-201ENST00000514691 285 ntBASIC0.22□□□□□ -2.37
SKP1P63208 AC011195.1-201ENST00000578177 177 ntBASIC0.22□□□□□ -2.37
SKP1P63208 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SKP1P63208 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.22□□□□□ -2.37
SKP1P63208 Y_RNA.112-201ENST00000363250 102 ntBASIC0.21□□□□□ -2.38
SKP1P63208 Y_RNA.265-201ENST00000364677 108 ntBASIC0.21□□□□□ -2.38
SKP1P63208 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
SKP1P63208 MIR489-201ENST00000384923 84 ntBASIC0.21□□□□□ -2.38
SKP1P63208 MIR1-2-201ENST00000384961 85 ntBASIC0.21□□□□□ -2.38
SKP1P63208 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
SKP1P63208 RNA5SP511-201ENST00000410487 115 ntBASIC0.21□□□□□ -2.38
SKP1P63208 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.21□□□□□ -2.38
SKP1P63208 AC093850.1-201ENST00000454121 251 ntBASIC0.21□□□□□ -2.38
SKP1P63208 AC067940.1-201ENST00000458411 300 ntBASIC0.21□□□□□ -2.38
SKP1P63208 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.21□□□□□ -2.38
SKP1P63208 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.21□□□□□ -2.38
SKP1P63208 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.21□□□□□ -2.38
SKP1P63208 FGF7P1-201ENST00000582820 288 ntBASIC0.21□□□□□ -2.38
SKP1P63208 U2.17-201ENST00000611454 95 ntBASIC0.21□□□□□ -2.38
SKP1P63208 AC007014.2-201ENST00000615581 479 ntBASIC0.21□□□□□ -2.38
SKP1P63208 MTND5P16-201ENST00000460269 1703 ntBASIC0.21□□□□□ -2.38
SKP1P63208 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SKP1P63208 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
SKP1P63208 MIR562-201ENST00000384894 95 ntBASIC0.2□□□□□ -2.38
SKP1P63208 MIR1185-2-201ENST00000408687 86 ntBASIC0.2□□□□□ -2.38
SKP1P63208 RNU2-29P-201ENST00000410423 189 ntBASIC0.2□□□□□ -2.38
SKP1P63208 AC104332.1-201ENST00000440471 797 ntBASIC0.2□□□□□ -2.38
SKP1P63208 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.2□□□□□ -2.38
SKP1P63208 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.2□□□□□ -2.38
SKP1P63208 RNU7-12P-201ENST00000516030 62 ntBASIC0.2□□□□□ -2.38
SKP1P63208 RNU1-117P-201ENST00000517041 158 ntBASIC0.2□□□□□ -2.38
SKP1P63208 AC087854.1-201ENST00000519706 414 ntBASIC0.2□□□□□ -2.38
SKP1P63208 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.2□□□□□ -2.38
SKP1P63208 TUSC7.1-201ENST00000610969 165 ntBASIC0.2□□□□□ -2.38
SKP1P63208 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.2□□□□□ -2.38
SKP1P63208 AC121333.1-201ENST00000567488 2709 ntBASIC0.19□□□□□ -2.38
SKP1P63208 RNY4P34-201ENST00000364779 95 ntBASIC0.19□□□□□ -2.38
SKP1P63208 RNU6-245P-201ENST00000384020 107 ntBASIC0.19□□□□□ -2.38
SKP1P63208 AL663109.1-201ENST00000411498 844 ntBASIC0.19□□□□□ -2.38
SKP1P63208 MRPS18CP6-201ENST00000423587 223 ntBASIC0.19□□□□□ -2.38
SKP1P63208 U8.21-201ENST00000459536 136 ntBASIC0.19□□□□□ -2.38
SKP1P63208 UBE2V1P12-201ENST00000503954 474 ntBASIC0.19□□□□□ -2.38
SKP1P63208 AC092436.3-201ENST00000511788 257 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms