Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNA5SP496-201ENST00000391240 109 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 SNORA75.6-201ENST00000391318 127 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 RNU6-757P-201ENST00000410334 100 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 ZNF885P-201ENST00000420174 1098 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 HSFY5P-201ENST00000453726 309 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 MTCO2P29-201ENST00000465212 189 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.33□□□□□ -2.46
LSM3P62310 AC010493.1-201ENST00000513479 292 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 RNU6-276P-201ENST00000516114 96 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 AC022616.3-201ENST00000523940 148 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 MTND4LP18-201ENST00000526864 291 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 AC104010.1-201ENST00000616889 150 ntBASIC-0.33□□□□□ -2.46
LSM3P62310 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.33□□□□□ -2.46
LSM3P62310 SNORD114-23-201ENST00000363536 72 ntBASIC-0.34□□□□□ -2.46
LSM3P62310 SNORA8.2-201ENST00000384372 139 ntBASIC-0.34□□□□□ -2.46
LSM3P62310 RNA5SP494-201ENST00000410653 129 ntBASIC-0.34□□□□□ -2.46
LSM3P62310 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.34□□□□□ -2.46
LSM3P62310 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.34□□□□□ -2.46
LSM3P62310 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.34□□□□□ -2.46
LSM3P62310 AL392103.1-201ENST00000447000 198 ntBASIC-0.34□□□□□ -2.46
LSM3P62310 AC091021.1-201ENST00000468051 388 ntBASIC-0.34□□□□□ -2.46
LSM3P62310 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.34□□□□□ -2.46
LSM3P62310 AC023932.2-201ENST00000603176 175 ntBASIC-0.34□□□□□ -2.46
LSM3P62310 AC009159.2-201ENST00000617603 606 ntBASIC-0.34□□□□□ -2.46
LSM3P62310 AC011155.2-201ENST00000623202 216 ntBASIC-0.34□□□□□ -2.46
LSM3P62310 SNORD87-201ENST00000364849 89 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 U8.7-201ENST00000364940 136 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 RNU6-533P-201ENST00000384144 107 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 RNU1-139P-201ENST00000391307 165 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 PCNPP3-201ENST00000393579 471 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 MIR891A-201ENST00000401237 79 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.35□□□□□ -2.47
LSM3P62310 AC098592.1-201ENST00000419352 333 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 PIGPP3-201ENST00000425307 415 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 MRPS10P1-201ENST00000448483 130 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.35□□□□□ -2.47
LSM3P62310 SNORA62.5-201ENST00000516634 120 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.35□□□□□ -2.47
LSM3P62310 AC093027.1-201ENST00000546698 429 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 AK6P2-201ENST00000549020 471 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.35□□□□□ -2.47
LSM3P62310 AC025449.1-201ENST00000603896 529 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 RMST_3.1-201ENST00000611651 109 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 AC010999.1-201ENST00000611856 324 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 AC098679.4-201ENST00000624241 654 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 SCARNA4-201ENST00000629045 128 ntBASIC-0.35□□□□□ -2.47
LSM3P62310 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.36□□□□□ -2.47
LSM3P62310 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 MIR593-201ENST00000384856 100 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 MIR516B2-201ENST00000385190 85 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 MIR643-201ENST00000385267 97 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 MIR1185-2-201ENST00000408687 86 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 RPS26P42-201ENST00000413485 326 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 RPL37P21-201ENST00000435890 276 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 AL603825.1-201ENST00000438481 80 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.36□□□□□ -2.47
LSM3P62310 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.36□□□□□ -2.47
LSM3P62310 RNU6-977P-201ENST00000516411 103 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 MRPS36P4-201ENST00000534436 298 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 MIR4298-201ENST00000584380 73 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 MIR8070-201ENST00000616510 88 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 AC104260.1-201ENST00000616660 539 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 RNU6-489P-201ENST00000618289 107 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 AC022418.1-201ENST00000624118 445 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 AC091948.2-201ENST00000636510 279 ntBASIC-0.36□□□□□ -2.47
LSM3P62310 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
LSM3P62310 RNU6-266P-201ENST00000364225 107 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 RNU6-660P-201ENST00000364566 109 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 RNU6-929P-201ENST00000384429 107 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 MIR145-201ENST00000384967 88 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC-0.37□□□□□ -2.47
LSM3P62310 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.37□□□□□ -2.47
LSM3P62310 Z98949.2-201ENST00000440996 144 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.37□□□□□ -2.47
LSM3P62310 AC112204.1-201ENST00000502591 103 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.37□□□□□ -2.47
LSM3P62310 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.37□□□□□ -2.47
LSM3P62310 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 RNU7-28P-201ENST00000516759 62 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.37□□□□□ -2.47
LSM3P62310 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.37□□□□□ -2.47
LSM3P62310 MIR3678-201ENST00000578455 94 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 MIR4764-201ENST00000580680 88 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 MIR5190-201ENST00000581537 80 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 AL078603.1-201ENST00000603824 313 ntBASIC-0.37□□□□□ -2.47
LSM3P62310 RNU6-833P-201ENST00000363486 107 ntBASIC-0.38□□□□□ -2.47
LSM3P62310 SNORD115.1-201ENST00000391109 76 ntBASIC-0.38□□□□□ -2.47
LSM3P62310 RNA5SP482-201ENST00000391269 118 ntBASIC-0.38□□□□□ -2.47
LSM3P62310 AL355143.1-201ENST00000407101 841 ntBASIC-0.38□□□□□ -2.47
LSM3P62310 AL590632.1-201ENST00000424289 371 ntBASIC-0.38□□□□□ -2.47
LSM3P62310 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.38□□□□□ -2.47
LSM3P62310 AC007215.1-201ENST00000464893 276 ntBASIC-0.38□□□□□ -2.47
LSM3P62310 RNU11-2P-201ENST00000516898 142 ntBASIC-0.38□□□□□ -2.47
LSM3P62310 SNORA74.3-201ENST00000517108 154 ntBASIC-0.38□□□□□ -2.47
LSM3P62310 AC010376.1-201ENST00000522101 334 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms