Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 MTND1P35-201ENST00000526739 508 ntBASIC0.61□□□□□ -2.31
RAB38P57729 AL360219.1-201ENST00000610230 366 ntBASIC0.61□□□□□ -2.31
RAB38P57729 U6.73-201ENST00000619194 103 ntBASIC0.61□□□□□ -2.31
RAB38P57729 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
RAB38P57729 AP000568.1-201ENST00000282964 442 ntBASIC0.6□□□□□ -2.31
RAB38P57729 RNU6-969P-201ENST00000383900 105 ntBASIC0.6□□□□□ -2.31
RAB38P57729 MIR450B-201ENST00000401182 78 ntBASIC0.6□□□□□ -2.31
RAB38P57729 AL451046.2-201ENST00000403074 277 ntBASIC0.6□□□□□ -2.31
RAB38P57729 AL355796.1-201ENST00000406706 323 ntBASIC0.6□□□□□ -2.31
RAB38P57729 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.6□□□□□ -2.31
RAB38P57729 RNU6-189P-201ENST00000516120 101 ntBASIC0.6□□□□□ -2.31
RAB38P57729 RNU7-99P-201ENST00000516271 62 ntBASIC0.6□□□□□ -2.31
RAB38P57729 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.6□□□□□ -2.31
RAB38P57729 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
RAB38P57729 AC090049.2-201ENST00000550377 109 ntBASIC0.6□□□□□ -2.31
RAB38P57729 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.6□□□□□ -2.31
RAB38P57729 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
RAB38P57729 AC004223.2-201ENST00000590309 544 ntBASIC0.6□□□□□ -2.31
RAB38P57729 SNORD11B-201ENST00000607707 90 ntBASIC0.6□□□□□ -2.31
RAB38P57729 AC005609.4-201ENST00000625071 447 ntBASIC0.6□□□□□ -2.31
RAB38P57729 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
RAB38P57729 MIR605-201ENST00000385078 83 ntBASIC0.59□□□□□ -2.31
RAB38P57729 AL049545.1-201ENST00000401856 572 ntBASIC0.59□□□□□ -2.31
RAB38P57729 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.59□□□□□ -2.31
RAB38P57729 MTND1P27-201ENST00000451117 902 ntBASIC0.59□□□□□ -2.31
RAB38P57729 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.59□□□□□ -2.31
RAB38P57729 RNU7-94P-201ENST00000459576 63 ntBASIC0.59□□□□□ -2.31
RAB38P57729 RPS26P48-201ENST00000491713 339 ntBASIC0.59□□□□□ -2.31
RAB38P57729 MTND1P5-201ENST00000517906 940 ntBASIC0.59□□□□□ -2.31
RAB38P57729 MIR4424-201ENST00000585257 86 ntBASIC0.59□□□□□ -2.31
RAB38P57729 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.59□□□□□ -2.31
RAB38P57729 AL354950.2-201ENST00000617939 290 ntBASIC0.59□□□□□ -2.31
RAB38P57729 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.59□□□□□ -2.31
RAB38P57729 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.58□□□□□ -2.32
RAB38P57729 RNA5SP361-201ENST00000362686 118 ntBASIC0.58□□□□□ -2.32
RAB38P57729 MIR521-1-201ENST00000384902 87 ntBASIC0.58□□□□□ -2.32
RAB38P57729 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.58□□□□□ -2.32
RAB38P57729 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.58□□□□□ -2.32
RAB38P57729 MTCO3P18-201ENST00000440206 761 ntBASIC0.58□□□□□ -2.32
RAB38P57729 STAG3L5P-204ENST00000443759 179 ntBASIC0.58□□□□□ -2.32
RAB38P57729 RPL39P39-201ENST00000455840 151 ntBASIC0.58□□□□□ -2.32
RAB38P57729 MTCO2P18-201ENST00000457151 658 ntBASIC0.58□□□□□ -2.32
RAB38P57729 TPTE2P5-203ENST00000458118 728 ntBASIC0.58□□□□□ -2.32
RAB38P57729 MTCO3P38-201ENST00000468910 766 ntBASIC0.58□□□□□ -2.32
RAB38P57729 RPL23AP75-201ENST00000491601 451 ntBASIC0.58□□□□□ -2.32
RAB38P57729 RNU6-322P-201ENST00000516010 103 ntBASIC0.58□□□□□ -2.32
RAB38P57729 RNU6-430P-201ENST00000517078 107 ntBASIC0.58□□□□□ -2.32
RAB38P57729 AP001372.4-201ENST00000524889 472 ntBASIC0.58□□□□□ -2.32
RAB38P57729 AC007834.2-201ENST00000536310 343 ntBASIC0.58□□□□□ -2.32
RAB38P57729 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
RAB38P57729 MIR5000-201ENST00000577717 103 ntBASIC0.58□□□□□ -2.32
RAB38P57729 AL357312.1-201ENST00000603879 298 ntBASIC0.58□□□□□ -2.32
RAB38P57729 SNORA28-201ENST00000606769 126 ntBASIC0.58□□□□□ -2.32
RAB38P57729 MIR8076-201ENST00000611401 83 ntBASIC0.58□□□□□ -2.32
RAB38P57729 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.58□□□□□ -2.32
RAB38P57729 AC103705.1-201ENST00000619013 241 ntBASIC0.58□□□□□ -2.32
RAB38P57729 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
RAB38P57729 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.57□□□□□ -2.32
RAB38P57729 RNU6-784P-201ENST00000384330 106 ntBASIC0.57□□□□□ -2.32
RAB38P57729 MIR1185-2-201ENST00000408687 86 ntBASIC0.57□□□□□ -2.32
RAB38P57729 RNU6-325P-201ENST00000411132 105 ntBASIC0.57□□□□□ -2.32
RAB38P57729 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.57□□□□□ -2.32
RAB38P57729 RPS26P5-201ENST00000418544 335 ntBASIC0.57□□□□□ -2.32
RAB38P57729 AL031667.1-201ENST00000440222 725 ntBASIC0.57□□□□□ -2.32
RAB38P57729 RNU6-917P-201ENST00000516294 104 ntBASIC0.57□□□□□ -2.32
RAB38P57729 RNA5SP54-201ENST00000516951 92 ntBASIC0.57□□□□□ -2.32
RAB38P57729 RNU6-1223P-201ENST00000517124 104 ntBASIC0.57□□□□□ -2.32
RAB38P57729 APOOP3-201ENST00000536787 586 ntBASIC0.57□□□□□ -2.32
RAB38P57729 AL157687.1-201ENST00000554853 619 ntBASIC0.57□□□□□ -2.32
RAB38P57729 FRG2DP-202ENST00000566967 323 ntBASIC0.57□□□□□ -2.32
RAB38P57729 AC087683.1-201ENST00000591187 441 ntBASIC0.57□□□□□ -2.32
RAB38P57729 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.57□□□□□ -2.32
RAB38P57729 AC092747.3-201ENST00000603769 301 ntBASIC0.57□□□□□ -2.32
RAB38P57729 AL078603.1-201ENST00000603824 313 ntBASIC0.57□□□□□ -2.32
RAB38P57729 AL357078.3-201ENST00000607528 618 ntBASIC0.57□□□□□ -2.32
RAB38P57729 AC109347.2-201ENST00000610220 349 ntBASIC0.57□□□□□ -2.32
RAB38P57729 RNU6-1266P-201ENST00000362794 105 ntBASIC0.56□□□□□ -2.32
RAB38P57729 RNU6-82P-201ENST00000363970 107 ntBASIC0.56□□□□□ -2.32
RAB38P57729 RNU6-245P-201ENST00000384020 107 ntBASIC0.56□□□□□ -2.32
RAB38P57729 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
RAB38P57729 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.56□□□□□ -2.32
RAB38P57729 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.56□□□□□ -2.32
RAB38P57729 TPT1P7-201ENST00000458300 517 ntBASIC0.56□□□□□ -2.32
RAB38P57729 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.56□□□□□ -2.32
RAB38P57729 RNA5SP255-201ENST00000516370 107 ntBASIC0.56□□□□□ -2.32
RAB38P57729 MTCO2P4-201ENST00000517968 247 ntBASIC0.56□□□□□ -2.32
RAB38P57729 Y_RNA.116-201ENST00000363292 103 ntBASIC0.55□□□□□ -2.32
RAB38P57729 U3.8-201ENST00000363675 217 ntBASIC0.55□□□□□ -2.32
RAB38P57729 SNORD87-201ENST00000364849 89 ntBASIC0.55□□□□□ -2.32
RAB38P57729 SNORA2.2-201ENST00000365473 135 ntBASIC0.55□□□□□ -2.32
RAB38P57729 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
RAB38P57729 RNU5A-6P-201ENST00000384136 116 ntBASIC0.55□□□□□ -2.32
RAB38P57729 RNU6-1158P-201ENST00000391167 107 ntBASIC0.55□□□□□ -2.32
RAB38P57729 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.55□□□□□ -2.32
RAB38P57729 AL445305.1-201ENST00000432577 575 ntBASIC0.55□□□□□ -2.32
RAB38P57729 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.55□□□□□ -2.32
RAB38P57729 AL359672.1-201ENST00000442302 409 ntBASIC0.55□□□□□ -2.32
RAB38P57729 NDUFB4P10-201ENST00000452541 359 ntBASIC0.55□□□□□ -2.32
RAB38P57729 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.55□□□□□ -2.32
RAB38P57729 RNU7-21P-201ENST00000459430 62 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms