Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORD11B-201ENST00000607707 90 ntBASIC1.96□□□□□ -2.1
CDH11P55287 MIR6132-201ENST00000622083 109 ntBASIC1.96□□□□□ -2.1
CDH11P55287 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH11P55287 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDH11P55287 ZNF72P-201ENST00000425869 1908 ntBASIC1.95□□□□□ -2.1
CDH11P55287 MTND5P35-201ENST00000557537 1720 ntBASIC1.95□□□□□ -2.1
CDH11P55287 Y_RNA.179-201ENST00000363844 90 ntBASIC1.95□□□□□ -2.1
CDH11P55287 SNORA3A-201ENST00000364113 130 ntBASIC1.95□□□□□ -2.1
CDH11P55287 RNU6-708P-201ENST00000384217 107 ntBASIC1.95□□□□□ -2.1
CDH11P55287 MIR221-201ENST00000385135 110 ntBASIC1.95□□□□□ -2.1
CDH11P55287 SNORA48.3-201ENST00000391081 134 ntBASIC1.95□□□□□ -2.1
CDH11P55287 Y_RNA.605-201ENST00000410577 105 ntBASIC1.95□□□□□ -2.1
CDH11P55287 AC123900.1-201ENST00000420390 96 ntBASIC1.95□□□□□ -2.1
CDH11P55287 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH11P55287 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
CDH11P55287 RPL23AP7-203ENST00000449021 469 ntBASIC1.95□□□□□ -2.1
CDH11P55287 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
CDH11P55287 AL137159.1-201ENST00000452808 512 ntBASIC1.95□□□□□ -2.1
CDH11P55287 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
CDH11P55287 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
CDH11P55287 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH11P55287 AC006600.1-201ENST00000572529 153 ntBASIC1.95□□□□□ -2.1
CDH11P55287 MIR4719-201ENST00000585233 84 ntBASIC1.95□□□□□ -2.1
CDH11P55287 AC068205.3-201ENST00000636385 468 ntBASIC1.95□□□□□ -2.1
CDH11P55287 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.95□□□□□ -2.1
CDH11P55287 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
CDH11P55287 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.94□□□□□ -2.1
CDH11P55287 Y_RNA.39-201ENST00000362620 98 ntBASIC1.94□□□□□ -2.1
CDH11P55287 Y_RNA.99-201ENST00000363138 105 ntBASIC1.94□□□□□ -2.1
CDH11P55287 RNU6-1164P-201ENST00000364428 107 ntBASIC1.94□□□□□ -2.1
CDH11P55287 Y_RNA.415-201ENST00000384012 112 ntBASIC1.94□□□□□ -2.1
CDH11P55287 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CDH11P55287 MIR300-201ENST00000401138 83 ntBASIC1.94□□□□□ -2.1
CDH11P55287 ELOCP21-201ENST00000412558 336 ntBASIC1.94□□□□□ -2.1
CDH11P55287 NDUFB4P10-201ENST00000452541 359 ntBASIC1.94□□□□□ -2.1
CDH11P55287 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.94□□□□□ -2.1
CDH11P55287 AC010531.2-201ENST00000465012 153 ntBASIC1.94□□□□□ -2.1
CDH11P55287 UBL5P3-201ENST00000475112 231 ntBASIC1.94□□□□□ -2.1
CDH11P55287 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.94□□□□□ -2.1
CDH11P55287 SNORA25.10-201ENST00000515926 124 ntBASIC1.94□□□□□ -2.1
CDH11P55287 Y_RNA.683-201ENST00000516508 93 ntBASIC1.94□□□□□ -2.1
CDH11P55287 RNU6-1012P-201ENST00000516606 109 ntBASIC1.94□□□□□ -2.1
CDH11P55287 GNAI2P1-201ENST00000541815 315 ntBASIC1.94□□□□□ -2.1
CDH11P55287 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
CDH11P55287 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH11P55287 MTND5P6-201ENST00000422338 1798 ntBASIC1.94□□□□□ -2.1
CDH11P55287 AC091812.1-201ENST00000432235 1948 ntBASIC1.93□□□□□ -2.1
CDH11P55287 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDH11P55287 Y_RNA.27-201ENST00000362540 103 ntBASIC1.93□□□□□ -2.1
CDH11P55287 RNU6-879P-201ENST00000364328 108 ntBASIC1.93□□□□□ -2.1
CDH11P55287 SNORD114-6-201ENST00000364393 72 ntBASIC1.93□□□□□ -2.1
CDH11P55287 SNORD87-201ENST00000364849 89 ntBASIC1.93□□□□□ -2.1
CDH11P55287 RNA5SP138-201ENST00000365098 114 ntBASIC1.93□□□□□ -2.1
CDH11P55287 Y_RNA.326-201ENST00000365176 113 ntBASIC1.93□□□□□ -2.1
CDH11P55287 RNU6-975P-201ENST00000384296 105 ntBASIC1.93□□□□□ -2.1
CDH11P55287 AL033519.2-201ENST00000403958 392 ntBASIC1.93□□□□□ -2.1
CDH11P55287 AL356379.1-201ENST00000414105 126 ntBASIC1.93□□□□□ -2.1
CDH11P55287 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.93□□□□□ -2.1
CDH11P55287 AL160004.2-201ENST00000432935 350 ntBASIC1.93□□□□□ -2.1
CDH11P55287 AC010469.2-201ENST00000496412 480 ntBASIC1.93□□□□□ -2.1
CDH11P55287 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.93□□□□□ -2.1
CDH11P55287 RNA5SP200-201ENST00000516360 103 ntBASIC1.93□□□□□ -2.1
CDH11P55287 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.93□□□□□ -2.1
CDH11P55287 AC083806.3-201ENST00000614016 455 ntBASIC1.93□□□□□ -2.1
CDH11P55287 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CDH11P55287 AC005592.1-201ENST00000566527 1640 ntBASIC1.92□□□□□ -2.1
CDH11P55287 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
CDH11P55287 RNU6-727P-201ENST00000363592 107 ntBASIC1.92□□□□□ -2.1
CDH11P55287 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
CDH11P55287 SNORD14D-201ENST00000384390 87 ntBASIC1.92□□□□□ -2.1
CDH11P55287 MIR548B-201ENST00000385247 97 ntBASIC1.92□□□□□ -2.1
CDH11P55287 MRPL42P3-201ENST00000401492 326 ntBASIC1.92□□□□□ -2.1
CDH11P55287 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
CDH11P55287 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH11P55287 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH11P55287 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH11P55287 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.92□□□□□ -2.1
CDH11P55287 RPL26P26-201ENST00000480251 434 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC093852.1-201ENST00000503587 266 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC067942.3-201ENST00000512025 362 ntBASIC1.92□□□□□ -2.1
CDH11P55287 RNU6-988P-201ENST00000519081 107 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC091144.1-201ENST00000519573 138 ntBASIC1.92□□□□□ -2.1
CDH11P55287 CYCSP23-201ENST00000519781 313 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH11P55287 AC023442.1-201ENST00000531247 422 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH11P55287 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH11P55287 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH11P55287 MIR3126-201ENST00000577443 74 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC002984.1-201ENST00000591692 448 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC104695.3-201ENST00000604052 296 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC025754.2-201ENST00000606491 432 ntBASIC1.92□□□□□ -2.1
CDH11P55287 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
CDH11P55287 AL138825.1-201ENST00000618587 192 ntBASIC1.92□□□□□ -2.1
CDH11P55287 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.92□□□□□ -2.1
CDH11P55287 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDH11P55287 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.91□□□□□ -2.1
CDH11P55287 SNORA33.2-201ENST00000365413 134 ntBASIC1.91□□□□□ -2.1
CDH11P55287 RNU6-1026P-201ENST00000384465 108 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms