Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDH4P55283 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
CDH4P55283 Y_RNA.135-201ENST00000363439 95 ntBASIC1.16□□□□□ -2.22
CDH4P55283 RNA5SP259-201ENST00000365541 109 ntBASIC1.16□□□□□ -2.22
CDH4P55283 SNORA67.2-201ENST00000384300 149 ntBASIC1.16□□□□□ -2.22
CDH4P55283 MIR515-2-201ENST00000384883 83 ntBASIC1.16□□□□□ -2.22
CDH4P55283 MIR515-1-201ENST00000384884 83 ntBASIC1.16□□□□□ -2.22
CDH4P55283 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CDH4P55283 RNA5SP323-201ENST00000391094 133 ntBASIC1.16□□□□□ -2.22
CDH4P55283 RNU6-332P-201ENST00000391193 108 ntBASIC1.16□□□□□ -2.22
CDH4P55283 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
CDH4P55283 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.16□□□□□ -2.22
CDH4P55283 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.16□□□□□ -2.22
CDH4P55283 MTND1P35-201ENST00000526739 508 ntBASIC1.16□□□□□ -2.22
CDH4P55283 RAB11AP2-201ENST00000545905 639 ntBASIC1.16□□□□□ -2.22
CDH4P55283 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.16□□□□□ -2.22
CDH4P55283 AL442163.3-201ENST00000554110 156 ntBASIC1.16□□□□□ -2.22
CDH4P55283 MIR3672-201ENST00000584290 82 ntBASIC1.16□□□□□ -2.22
CDH4P55283 AC009033.1-201ENST00000624279 431 ntBASIC1.16□□□□□ -2.22
CDH4P55283 SCARNA4-201ENST00000629045 128 ntBASIC1.16□□□□□ -2.22
CDH4P55283 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.16□□□□□ -2.22
CDH4P55283 AC024614.3-201ENST00000637860 256 ntBASIC1.16□□□□□ -2.22
CDH4P55283 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDH4P55283 MTND4P5-201ENST00000435821 1374 ntBASIC1.16□□□□□ -2.22
CDH4P55283 RNU6-933P-201ENST00000384424 107 ntBASIC1.15□□□□□ -2.23
CDH4P55283 Y_RNA.530-201ENST00000384587 101 ntBASIC1.15□□□□□ -2.23
CDH4P55283 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CDH4P55283 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.15□□□□□ -2.23
CDH4P55283 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.15□□□□□ -2.23
CDH4P55283 RNU7-57P-201ENST00000459540 60 ntBASIC1.15□□□□□ -2.23
CDH4P55283 HMGN1P7-201ENST00000491722 313 ntBASIC1.15□□□□□ -2.23
CDH4P55283 RNU6-314P-201ENST00000516574 104 ntBASIC1.15□□□□□ -2.23
CDH4P55283 AL512310.8-201ENST00000550183 120 ntBASIC1.15□□□□□ -2.23
CDH4P55283 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.15□□□□□ -2.23
CDH4P55283 AC097065.2-201ENST00000608159 533 ntBASIC1.15□□□□□ -2.23
CDH4P55283 AC015540.1-201ENST00000615828 501 ntBASIC1.15□□□□□ -2.23
CDH4P55283 MIR8065-201ENST00000620577 100 ntBASIC1.15□□□□□ -2.23
CDH4P55283 RNU6-534P-201ENST00000364877 106 ntBASIC1.14□□□□□ -2.23
CDH4P55283 Y_RNA.554-201ENST00000384672 102 ntBASIC1.14□□□□□ -2.23
CDH4P55283 MIR586-201ENST00000385035 97 ntBASIC1.14□□□□□ -2.23
CDH4P55283 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CDH4P55283 RNA5SP109-201ENST00000391010 116 ntBASIC1.14□□□□□ -2.23
CDH4P55283 RNA5SP467-201ENST00000391274 118 ntBASIC1.14□□□□□ -2.23
CDH4P55283 MIR320B2-201ENST00000408479 138 ntBASIC1.14□□□□□ -2.23
CDH4P55283 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.14□□□□□ -2.23
CDH4P55283 ZNF885P-201ENST00000420174 1098 ntBASIC1.14□□□□□ -2.23
CDH4P55283 Z82188.1-201ENST00000436709 154 ntBASIC1.14□□□□□ -2.23
CDH4P55283 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
CDH4P55283 TRBVA-201ENST00000498804 316 ntBASIC1.14□□□□□ -2.23
CDH4P55283 MTCO2P30-201ENST00000503662 364 ntBASIC1.14□□□□□ -2.23
CDH4P55283 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.14□□□□□ -2.23
CDH4P55283 RNU7-40P-201ENST00000516397 64 ntBASIC1.14□□□□□ -2.23
CDH4P55283 RNU6-256P-201ENST00000516747 97 ntBASIC1.14□□□□□ -2.23
CDH4P55283 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
CDH4P55283 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.14□□□□□ -2.23
CDH4P55283 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.14□□□□□ -2.23
CDH4P55283 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.14□□□□□ -2.23
CDH4P55283 AL078596.1-201ENST00000624856 447 ntBASIC1.14□□□□□ -2.23
CDH4P55283 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CDH4P55283 Y_RNA.287-201ENST00000364853 94 ntBASIC1.13□□□□□ -2.23
CDH4P55283 MIR181A1-201ENST00000385026 110 ntBASIC1.13□□□□□ -2.23
CDH4P55283 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
CDH4P55283 RNA5SP504-201ENST00000410676 117 ntBASIC1.13□□□□□ -2.23
CDH4P55283 TOMM22P2-201ENST00000430735 237 ntBASIC1.13□□□□□ -2.23
CDH4P55283 PCMTD1P1-201ENST00000455560 355 ntBASIC1.13□□□□□ -2.23
CDH4P55283 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.13□□□□□ -2.23
CDH4P55283 RN7SKP88-201ENST00000516847 250 ntBASIC1.13□□□□□ -2.23
CDH4P55283 AC109635.3-201ENST00000529536 185 ntBASIC1.13□□□□□ -2.23
CDH4P55283 TPRKBP2-201ENST00000565969 475 ntBASIC1.13□□□□□ -2.23
CDH4P55283 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.13□□□□□ -2.23
CDH4P55283 MZT1P2-201ENST00000604387 248 ntBASIC1.13□□□□□ -2.23
CDH4P55283 AC080078.3-201ENST00000605407 463 ntBASIC1.13□□□□□ -2.23
CDH4P55283 7SK.8-201ENST00000612110 250 ntBASIC1.13□□□□□ -2.23
CDH4P55283 7SK.11-201ENST00000615477 250 ntBASIC1.13□□□□□ -2.23
CDH4P55283 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.13□□□□□ -2.23
CDH4P55283 AC137590.2-201ENST00000619709 240 ntBASIC1.13□□□□□ -2.23
CDH4P55283 7SK.13-201ENST00000622040 250 ntBASIC1.13□□□□□ -2.23
CDH4P55283 AC099654.5-201ENST00000636479 350 ntBASIC1.13□□□□□ -2.23
CDH4P55283 ZNF204P-201ENST00000416749 2397 ntBASIC1.13□□□□□ -2.23
CDH4P55283 RNU1-22P-201ENST00000363334 158 ntBASIC1.12□□□□□ -2.23
CDH4P55283 RNY4P14-201ENST00000363656 96 ntBASIC1.12□□□□□ -2.23
CDH4P55283 SNORD115-8-201ENST00000363856 82 ntBASIC1.12□□□□□ -2.23
CDH4P55283 Y_RNA.212-201ENST00000364177 102 ntBASIC1.12□□□□□ -2.23
CDH4P55283 SNORD115-38-201ENST00000365037 82 ntBASIC1.12□□□□□ -2.23
CDH4P55283 Y_RNA.414-201ENST00000384011 101 ntBASIC1.12□□□□□ -2.23
CDH4P55283 RNU6-790P-201ENST00000384479 105 ntBASIC1.12□□□□□ -2.23
CDH4P55283 RPL21P1-201ENST00000399532 476 ntBASIC1.12□□□□□ -2.23
CDH4P55283 RNU6-1148P-201ENST00000410992 104 ntBASIC1.12□□□□□ -2.23
CDH4P55283 MRPL35P3-201ENST00000421557 364 ntBASIC1.12□□□□□ -2.23
CDH4P55283 AL589823.1-201ENST00000429577 183 ntBASIC1.12□□□□□ -2.23
CDH4P55283 AL353572.1-201ENST00000442490 417 ntBASIC1.12□□□□□ -2.23
CDH4P55283 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.12□□□□□ -2.23
CDH4P55283 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
CDH4P55283 AC105313.1-201ENST00000509121 353 ntBASIC1.12□□□□□ -2.23
CDH4P55283 RNU1-117P-201ENST00000517041 158 ntBASIC1.12□□□□□ -2.23
CDH4P55283 MTND1P5-201ENST00000517906 940 ntBASIC1.12□□□□□ -2.23
CDH4P55283 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.12□□□□□ -2.23
CDH4P55283 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.12□□□□□ -2.23
CDH4P55283 EIF1P4-201ENST00000572664 335 ntBASIC1.12□□□□□ -2.23
CDH4P55283 MIR3942-201ENST00000585264 109 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms