Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 SNORA17.3-201ENST00000391159 129 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 AC243428.1-201ENST00000421099 264 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.1□□□□□ -2.23
CX3CR1P49238 USP9YP30-201ENST00000430729 455 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 DAP3P1-201ENST00000441522 278 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 AL606517.2-201ENST00000442855 241 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.1□□□□□ -2.23
CX3CR1P49238 RNU6-498P-201ENST00000459468 107 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 Y_RNA.655-201ENST00000515919 96 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 RNU1-117P-201ENST00000517041 158 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 RAB11AP2-201ENST00000545905 639 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.1□□□□□ -2.23
CX3CR1P49238 AC009248.2-201ENST00000619826 254 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 AC006504.8-201ENST00000621046 635 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 AC006001.4-201ENST00000622243 395 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 AC009033.1-201ENST00000624279 431 ntBASIC1.1□□□□□ -2.23
CX3CR1P49238 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.1□□□□□ -2.23
CX3CR1P49238 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
CX3CR1P49238 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CX3CR1P49238 Y_RNA.48-201ENST00000362710 103 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 RNU6-873P-201ENST00000363833 107 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 SNORD115-32-201ENST00000364079 82 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 SNORA25.8-201ENST00000364831 128 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 RNU6-417P-201ENST00000384712 107 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 RNA5SP467-201ENST00000391274 118 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 RNU6-57P-201ENST00000411348 103 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 SNX2P2-201ENST00000424553 323 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 MTATP6P13-201ENST00000438531 667 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.09□□□□□ -2.23
CX3CR1P49238 MTND1P17-201ENST00000448961 204 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 RN7SKP210-201ENST00000459176 261 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 RNU7-57P-201ENST00000459540 60 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 RPS26P45-201ENST00000471748 340 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 AC108210.2-201ENST00000503681 201 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.09□□□□□ -2.23
CX3CR1P49238 RNU4-49P-201ENST00000516080 140 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 RNA5SP454-201ENST00000517231 127 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.09□□□□□ -2.23
CX3CR1P49238 AC090821.2-201ENST00000523552 176 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 MIR4709-201ENST00000577272 72 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 MIR4421-201ENST00000578133 69 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 AC124303.1-201ENST00000605703 360 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 AL365434.2-201ENST00000607979 234 ntBASIC1.09□□□□□ -2.23
CX3CR1P49238 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
CX3CR1P49238 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
CX3CR1P49238 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CX3CR1P49238 snoU2-30.2-201ENST00000362805 70 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RNU6-727P-201ENST00000363592 107 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RNU4-9P-201ENST00000364951 139 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 Y_RNA.319-201ENST00000365138 92 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 Y_RNA.415-201ENST00000384012 112 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RNU6-17P-201ENST00000384245 107 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RNU4-62P-201ENST00000410125 130 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RNU6-373P-201ENST00000411247 98 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RPL30P16-201ENST00000419341 429 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RPS29P29-201ENST00000456396 171 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 snoU13.23-201ENST00000458863 104 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RNU6-344P-201ENST00000516635 111 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 RNU6-566P-201ENST00000516790 107 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 AC025647.1-201ENST00000517879 253 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.08□□□□□ -2.24
CX3CR1P49238 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.08□□□□□ -2.24
CX3CR1P49238 AL442163.3-201ENST00000554110 156 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.08□□□□□ -2.24
CX3CR1P49238 FRG2DP-202ENST00000566967 323 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.08□□□□□ -2.24
CX3CR1P49238 MIR3660-201ENST00000584845 100 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 SNRPGP20-201ENST00000604477 205 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 AL355802.3-201ENST00000607571 545 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 AL359697.1-201ENST00000624879 587 ntBASIC1.08□□□□□ -2.24
CX3CR1P49238 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
CX3CR1P49238 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CX3CR1P49238 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CX3CR1P49238 Y_RNA.453-201ENST00000384223 109 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 MIR513A1-201ENST00000385138 129 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 MIR618-201ENST00000385287 98 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.07□□□□□ -2.24
CX3CR1P49238 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
CX3CR1P49238 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.07□□□□□ -2.24
CX3CR1P49238 TOMM22P2-201ENST00000430735 237 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 AC005002.2-201ENST00000438228 269 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.07□□□□□ -2.24
CX3CR1P49238 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.07□□□□□ -2.24
CX3CR1P49238 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.07□□□□□ -2.24
CX3CR1P49238 RPS27P1-201ENST00000450552 247 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 AC009474.2-201ENST00000451383 136 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 RPL31P58-201ENST00000469001 379 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 AP000870.1-201ENST00000472927 406 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 AC091179.3-201ENST00000474761 144 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 AL163195.1-201ENST00000496941 348 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 SNORA25.14-201ENST00000516481 132 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 RNU7-128P-201ENST00000517247 62 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 AL512310.8-201ENST00000550183 120 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 MZT1P2-201ENST00000604387 248 ntBASIC1.07□□□□□ -2.24
CX3CR1P49238 U4.5-201ENST00000617137 123 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms