Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.33□□□□□ -2.04
SOX2P48431 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.33□□□□□ -2.04
SOX2P48431 MIR3670-2-201ENST00000582974 65 ntBASIC2.33□□□□□ -2.04
SOX2P48431 MIR3670-1-201ENST00000584160 65 ntBASIC2.33□□□□□ -2.04
SOX2P48431 MIR3670-3-201ENST00000584855 65 ntBASIC2.33□□□□□ -2.04
SOX2P48431 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.33□□□□□ -2.04
SOX2P48431 RPL12P50-201ENST00000603116 116 ntBASIC2.33□□□□□ -2.04
SOX2P48431 MIR3670-4-201ENST00000612260 65 ntBASIC2.33□□□□□ -2.04
SOX2P48431 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.33□□□□□ -2.04
SOX2P48431 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SOX2P48431 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SOX2P48431 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
SOX2P48431 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.33□□□□□ -2.04
SOX2P48431 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.32□□□□□ -2.04
SOX2P48431 RNU6-454P-201ENST00000364292 107 ntBASIC2.32□□□□□ -2.04
SOX2P48431 RNU6-326P-201ENST00000365480 107 ntBASIC2.32□□□□□ -2.04
SOX2P48431 DEFA7P-201ENST00000382676 285 ntBASIC2.32□□□□□ -2.04
SOX2P48431 SUMO1P4-201ENST00000429430 302 ntBASIC2.32□□□□□ -2.04
SOX2P48431 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.32□□□□□ -2.04
SOX2P48431 AC104389.3-201ENST00000445629 235 ntBASIC2.32□□□□□ -2.04
SOX2P48431 RPL23AP3-201ENST00000453844 468 ntBASIC2.32□□□□□ -2.04
SOX2P48431 MTND4LP30-201ENST00000454092 297 ntBASIC2.32□□□□□ -2.04
SOX2P48431 AC016925.1-201ENST00000458303 298 ntBASIC2.32□□□□□ -2.04
SOX2P48431 RNU7-57P-201ENST00000459540 60 ntBASIC2.32□□□□□ -2.04
SOX2P48431 SERF1AP1-201ENST00000514575 187 ntBASIC2.32□□□□□ -2.04
SOX2P48431 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.32□□□□□ -2.04
SOX2P48431 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.32□□□□□ -2.04
SOX2P48431 YPEL5P2-201ENST00000605553 359 ntBASIC2.32□□□□□ -2.04
SOX2P48431 U4atac.1-201ENST00000618345 95 ntBASIC2.32□□□□□ -2.04
SOX2P48431 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.32□□□□□ -2.04
SOX2P48431 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SOX2P48431 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SOX2P48431 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
SOX2P48431 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SOX2P48431 Y_RNA.383-201ENST00000383855 97 ntBASIC2.31□□□□□ -2.04
SOX2P48431 RNU6-975P-201ENST00000384296 105 ntBASIC2.31□□□□□ -2.04
SOX2P48431 Y_RNA.478-201ENST00000384358 107 ntBASIC2.31□□□□□ -2.04
SOX2P48431 AL138827.1-201ENST00000402666 306 ntBASIC2.31□□□□□ -2.04
SOX2P48431 MIR1185-2-201ENST00000408687 86 ntBASIC2.31□□□□□ -2.04
SOX2P48431 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.31□□□□□ -2.04
SOX2P48431 RNA5SP341-201ENST00000516261 117 ntBASIC2.31□□□□□ -2.04
SOX2P48431 SNORA31.15-201ENST00000516771 132 ntBASIC2.31□□□□□ -2.04
SOX2P48431 RNU6-667P-201ENST00000517186 102 ntBASIC2.31□□□□□ -2.04
SOX2P48431 RNU2-12P-201ENST00000517216 168 ntBASIC2.31□□□□□ -2.04
SOX2P48431 SNORA70.24-201ENST00000517233 118 ntBASIC2.31□□□□□ -2.04
SOX2P48431 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.31□□□□□ -2.04
SOX2P48431 MIR3128-201ENST00000581957 66 ntBASIC2.31□□□□□ -2.04
SOX2P48431 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.31□□□□□ -2.04
SOX2P48431 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.31□□□□□ -2.04
SOX2P48431 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SOX2P48431 SNORA25.1-201ENST00000362326 128 ntBASIC2.3□□□□□ -2.04
SOX2P48431 RNU6-379P-201ENST00000363813 104 ntBASIC2.3□□□□□ -2.04
SOX2P48431 RNU1-112P-201ENST00000364401 164 ntBASIC2.3□□□□□ -2.04
SOX2P48431 SNORA20.1-201ENST00000364790 130 ntBASIC2.3□□□□□ -2.04
SOX2P48431 Y_RNA.352-201ENST00000365439 102 ntBASIC2.3□□□□□ -2.04
SOX2P48431 SNORA25B-201ENST00000365507 128 ntBASIC2.3□□□□□ -2.04
SOX2P48431 RNU6-514P-201ENST00000384208 107 ntBASIC2.3□□□□□ -2.04
SOX2P48431 Y_RNA.477-201ENST00000384352 108 ntBASIC2.3□□□□□ -2.04
SOX2P48431 RNU2-48P-201ENST00000410694 191 ntBASIC2.3□□□□□ -2.04
SOX2P48431 RNU6-1199P-201ENST00000411249 104 ntBASIC2.3□□□□□ -2.04
SOX2P48431 AC009238.1-201ENST00000442165 424 ntBASIC2.3□□□□□ -2.04
SOX2P48431 AC009237.6-201ENST00000446969 424 ntBASIC2.3□□□□□ -2.04
SOX2P48431 AL137159.1-201ENST00000452808 512 ntBASIC2.3□□□□□ -2.04
SOX2P48431 AC018868.1-201ENST00000491307 315 ntBASIC2.3□□□□□ -2.04
SOX2P48431 RNU6-1023P-201ENST00000516137 106 ntBASIC2.3□□□□□ -2.04
SOX2P48431 RNU6-991P-201ENST00000516168 107 ntBASIC2.3□□□□□ -2.04
SOX2P48431 RNU6-948P-201ENST00000516374 107 ntBASIC2.3□□□□□ -2.04
SOX2P48431 RNU6-966P-201ENST00000516479 104 ntBASIC2.3□□□□□ -2.04
SOX2P48431 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
SOX2P48431 MIR3684-201ENST00000579779 74 ntBASIC2.3□□□□□ -2.04
SOX2P48431 AL162274.2-201ENST00000614406 332 ntBASIC2.3□□□□□ -2.04
SOX2P48431 snoZ196.1-201ENST00000625269 89 ntBASIC2.3□□□□□ -2.04
SOX2P48431 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SOX2P48431 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
SOX2P48431 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SOX2P48431 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SOX2P48431 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SOX2P48431 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.29□□□□□ -2.04
SOX2P48431 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SOX2P48431 RNU6-324P-201ENST00000363957 106 ntBASIC2.29□□□□□ -2.04
SOX2P48431 SNORA25.6-201ENST00000364121 118 ntBASIC2.29□□□□□ -2.04
SOX2P48431 Y_RNA.416-201ENST00000384014 113 ntBASIC2.29□□□□□ -2.04
SOX2P48431 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.29□□□□□ -2.04
SOX2P48431 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.29□□□□□ -2.04
SOX2P48431 MRPS10P1-201ENST00000448483 130 ntBASIC2.29□□□□□ -2.04
SOX2P48431 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.29□□□□□ -2.04
SOX2P48431 Y_RNA.673-201ENST00000516306 88 ntBASIC2.29□□□□□ -2.04
SOX2P48431 Y_RNA.680-201ENST00000516441 93 ntBASIC2.29□□□□□ -2.04
SOX2P48431 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.29□□□□□ -2.04
SOX2P48431 AC022080.3-201ENST00000544433 482 ntBASIC2.29□□□□□ -2.04
SOX2P48431 AC007179.3-201ENST00000604976 235 ntBASIC2.29□□□□□ -2.04
SOX2P48431 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SOX2P48431 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SOX2P48431 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SOX2P48431 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SOX2P48431 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SOX2P48431 AC009487.4-201ENST00000624969 3585 ntBASIC2.28□□□□□ -2.04
SOX2P48431 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SOX2P48431 Y_RNA.54-201ENST00000362766 105 ntBASIC2.28□□□□□ -2.04
SOX2P48431 Y_RNA.60-201ENST00000362831 98 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms