Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 AC093783.1-201ENST00000612976 329 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 MIR8074-201ENST00000615081 81 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 SCARNA4-201ENST00000629045 128 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 BX322639.1-202ENST00000423987 2213 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 ZNF204P-201ENST00000416749 2397 ntBASIC1.11□□□□□ -2.23
CXCL12P48061 RNU6-1305P-201ENST00000364353 104 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 Y_RNA.393-201ENST00000383936 102 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 RNU6-975P-201ENST00000384296 105 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 MIR548B-201ENST00000385247 97 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.1□□□□□ -2.23
CXCL12P48061 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.1□□□□□ -2.23
CXCL12P48061 HSPE1P9-201ENST00000440046 311 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 MTCO2P30-201ENST00000503662 364 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 AC008269.2-201ENST00000561915 1105 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.1□□□□□ -2.23
CXCL12P48061 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.1□□□□□ -2.23
CXCL12P48061 MIR3942-201ENST00000585264 109 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 AC069114.2-201ENST00000604699 304 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 AC012557.2-201ENST00000605919 418 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 AC090617.10-201ENST00000624308 134 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 AC010615.1-201ENST00000594254 1764 ntBASIC1.1□□□□□ -2.23
CXCL12P48061 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CXCL12P48061 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CXCL12P48061 RNU6-623P-201ENST00000363143 105 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 RNY4P14-201ENST00000363656 96 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 Y_RNA.212-201ENST00000364177 102 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 Y_RNA.402-201ENST00000383972 102 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 Y_RNA.414-201ENST00000384011 101 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 RNU6-1105P-201ENST00000384774 107 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 MIR520A-201ENST00000384862 85 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 MIR517A-201ENST00000385001 87 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 MIR181A1-201ENST00000385026 110 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 RPL30P13-201ENST00000418873 348 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 ZNF885P-201ENST00000420174 1098 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 UBE2V1P8-201ENST00000437166 265 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 TRBVA-201ENST00000498804 316 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.09□□□□□ -2.23
CXCL12P48061 AC025465.3-201ENST00000510570 311 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.09□□□□□ -2.23
CXCL12P48061 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 RNU6-948P-201ENST00000516374 107 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.09□□□□□ -2.23
CXCL12P48061 TPRKBP2-201ENST00000565969 475 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 SNORA77B-201ENST00000578179 125 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 POLR3GP2-201ENST00000588366 668 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 SNRPGP20-201ENST00000604477 205 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.09□□□□□ -2.23
CXCL12P48061 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 AC097065.2-201ENST00000608159 533 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 MIR338-201ENST00000636369 67 ntBASIC1.09□□□□□ -2.23
CXCL12P48061 MTND4P5-201ENST00000435821 1374 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CXCL12P48061 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
CXCL12P48061 Y_RNA.3-201ENST00000362331 103 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 Y_RNA.100-201ENST00000363141 102 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 Y_RNA.135-201ENST00000363439 95 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 SNORA33-201ENST00000363664 130 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 RNU6-414P-201ENST00000363705 104 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 RNU6-1019P-201ENST00000364424 107 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 SNORD116-11-201ENST00000383882 92 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 SNORA67.2-201ENST00000384300 149 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 MIR32-201ENST00000384965 70 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 RNU2-7P-201ENST00000410794 178 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 AL445305.1-201ENST00000432577 575 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.08□□□□□ -2.24
CXCL12P48061 HMGN1P13-201ENST00000505795 138 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 RNU6-720P-201ENST00000516363 108 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 RNU2-34P-201ENST00000516534 121 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 RNU6-273P-201ENST00000516937 96 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 RNU1-117P-201ENST00000517041 158 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 AP001485.1-201ENST00000604799 199 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 AC019193.3-201ENST00000609144 554 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 AC137590.2-201ENST00000619709 240 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 AC006504.8-201ENST00000621046 635 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 AC006001.4-201ENST00000622243 395 ntBASIC1.08□□□□□ -2.24
CXCL12P48061 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.07□□□□□ -2.24
CXCL12P48061 Y_RNA.9-201ENST00000362354 101 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RNU4-12P-201ENST00000365233 139 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 Y_RNA.450-201ENST00000384198 113 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 Y_RNA.516-201ENST00000384541 124 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RNU6-1235P-201ENST00000384559 107 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RNU6-306P-201ENST00000384617 107 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RNU6-1148P-201ENST00000410992 104 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RNU6-57P-201ENST00000411348 103 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 HMGN2P34-201ENST00000437647 269 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.07□□□□□ -2.24
CXCL12P48061 snoU13.9-201ENST00000458927 103 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RNU6-498P-201ENST00000459468 107 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RNU7-57P-201ENST00000459540 60 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 AC114982.1-201ENST00000469402 321 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RPL26P26-201ENST00000480251 434 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.07□□□□□ -2.24
CXCL12P48061 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.07□□□□□ -2.24
CXCL12P48061 EIF1P4-201ENST00000572664 335 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 AL353149.1-201ENST00000610667 244 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms