Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AP003465.2-201ENST00000602571 373 ntBASIC1.11□□□□□ -2.23
TNFSF9P41273 AC146944.4-201ENST00000602697 718 ntBASIC1.11□□□□□ -2.23
TNFSF9P41273 AC015540.1-201ENST00000615828 501 ntBASIC1.11□□□□□ -2.23
TNFSF9P41273 AC073534.2-201ENST00000620377 381 ntBASIC1.11□□□□□ -2.23
TNFSF9P41273 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.11□□□□□ -2.23
TNFSF9P41273 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.11□□□□□ -2.23
TNFSF9P41273 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TNFSF9P41273 Y_RNA.100-201ENST00000363141 102 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 RNU6-1065P-201ENST00000384513 106 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 RNU6-306P-201ENST00000384617 107 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 SNORD115-47-201ENST00000391226 86 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 EIF4E2P1-201ENST00000393781 255 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 AL117342.1-201ENST00000404861 406 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 AC069257.2-201ENST00000441819 155 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.1□□□□□ -2.23
TNFSF9P41273 RPL30P7-201ENST00000479312 323 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 AC069439.1-201ENST00000494739 167 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 RNU6-720P-201ENST00000516363 108 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 RRN3P3-201ENST00000549207 578 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.1□□□□□ -2.23
TNFSF9P41273 CYP3A52P-201ENST00000563326 91 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 AC015688.6-201ENST00000577737 104 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 MIR4753-201ENST00000585119 83 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 AL162413.1-201ENST00000603198 110 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 AL355802.3-201ENST00000607571 545 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 AL138726.1-201ENST00000614873 333 ntBASIC1.1□□□□□ -2.23
TNFSF9P41273 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.1□□□□□ -2.23
TNFSF9P41273 MTND4P5-201ENST00000435821 1374 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TNFSF9P41273 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 RNU6-562P-201ENST00000362731 107 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 RNU6-831P-201ENST00000384548 107 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 MIR300-201ENST00000401138 83 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 SEPT14P3-201ENST00000439401 183 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AL732372.2-207ENST00000445840 183 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 SEPT14P2-201ENST00000453405 183 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AC079354.2-201ENST00000453523 154 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 MTCO3P8-201ENST00000453691 755 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 RPS26P45-201ENST00000471748 340 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AC092989.1-201ENST00000481235 277 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 RPS29P25-201ENST00000481709 171 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.09□□□□□ -2.23
TNFSF9P41273 TRBVA-201ENST00000498804 316 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.23
TNFSF9P41273 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.09□□□□□ -2.23
TNFSF9P41273 AC067942.3-201ENST00000512025 362 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 SEPT14P4-201ENST00000513445 186 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 RNU6-718P-201ENST00000516166 105 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.09□□□□□ -2.23
TNFSF9P41273 FO082796.1-201ENST00000523795 183 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AC012557.2-201ENST00000605919 418 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AC097065.2-201ENST00000608159 533 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AL133215.3-201ENST00000609801 448 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.09□□□□□ -2.23
TNFSF9P41273 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.09□□□□□ -2.23
TNFSF9P41273 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.09□□□□□ -2.23
TNFSF9P41273 AC121333.1-201ENST00000567488 2709 ntBASIC1.09□□□□□ -2.24
TNFSF9P41273 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
TNFSF9P41273 Y_RNA.212-201ENST00000364177 102 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 RNU4-12P-201ENST00000365233 139 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 Y_RNA.481-201ENST00000384373 102 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 MIR1283-1-201ENST00000408494 87 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFSF9P41273 EIF1P1-201ENST00000421436 341 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 CST2P1-201ENST00000425770 87 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 RPL23AP75-201ENST00000491601 451 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 AL163195.1-201ENST00000496941 348 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 AC105313.1-201ENST00000509121 353 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.08□□□□□ -2.24
TNFSF9P41273 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TNFSF9P41273 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFSF9P41273 AC026371.1-201ENST00000551867 419 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFSF9P41273 EIF1P4-201ENST00000572664 335 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFSF9P41273 DISC2.1-201ENST00000612827 205 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 AC100810.6-201ENST00000638068 285 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 BX322639.1-202ENST00000423987 2213 ntBASIC1.08□□□□□ -2.24
TNFSF9P41273 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
TNFSF9P41273 Y_RNA.48-201ENST00000362710 103 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 Y_RNA.89-201ENST00000363031 102 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 RNY1-201ENST00000364228 113 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 RNU6-534P-201ENST00000364877 106 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 SNORA4.2-201ENST00000365313 147 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 RNU6-1286P-201ENST00000383871 107 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 Y_RNA.450-201ENST00000384198 113 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 RNA5SP504-201ENST00000410676 117 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.07□□□□□ -2.24
TNFSF9P41273 AC004386.2-201ENST00000441858 148 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 AC091885.1-201ENST00000506658 268 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 RNU6-256P-201ENST00000516747 97 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 AK6P2-201ENST00000549020 471 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 MIR4709-201ENST00000577272 72 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 MIR5006-201ENST00000583027 110 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms