Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 RNU6-625P-201ENST00000459412 107 ntBASIC2.19□□□□□ -2.06
RPL3P39023 HMGN2P9-201ENST00000476875 229 ntBASIC2.19□□□□□ -2.06
RPL3P39023 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.19□□□□□ -2.06
RPL3P39023 AC074133.1-201ENST00000515696 183 ntBASIC2.19□□□□□ -2.06
RPL3P39023 RNU6-966P-201ENST00000516479 104 ntBASIC2.19□□□□□ -2.06
RPL3P39023 SNORA40.15-201ENST00000516884 107 ntBASIC2.19□□□□□ -2.06
RPL3P39023 MYL12BP1-201ENST00000569826 507 ntBASIC2.19□□□□□ -2.06
RPL3P39023 MIR4423-201ENST00000580922 80 ntBASIC2.19□□□□□ -2.06
RPL3P39023 MIR4300-201ENST00000581016 96 ntBASIC2.19□□□□□ -2.06
RPL3P39023 MIR4503-201ENST00000582187 83 ntBASIC2.19□□□□□ -2.06
RPL3P39023 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPL3P39023 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.18□□□□□ -2.06
RPL3P39023 Y_RNA.149-201ENST00000363558 117 ntBASIC2.18□□□□□ -2.06
RPL3P39023 RNU6-525P-201ENST00000363685 104 ntBASIC2.18□□□□□ -2.06
RPL3P39023 Y_RNA.176-201ENST00000363815 109 ntBASIC2.18□□□□□ -2.06
RPL3P39023 RNU6-743P-201ENST00000364151 106 ntBASIC2.18□□□□□ -2.06
RPL3P39023 RNU6-472P-201ENST00000384299 107 ntBASIC2.18□□□□□ -2.06
RPL3P39023 MIR215-201ENST00000384858 110 ntBASIC2.18□□□□□ -2.06
RPL3P39023 SNORD115-46-201ENST00000390982 71 ntBASIC2.18□□□□□ -2.06
RPL3P39023 NDUFB4P4-201ENST00000404822 243 ntBASIC2.18□□□□□ -2.06
RPL3P39023 RPS15AP28-201ENST00000435088 386 ntBASIC2.18□□□□□ -2.06
RPL3P39023 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.18□□□□□ -2.06
RPL3P39023 AC107222.1-201ENST00000510899 637 ntBASIC2.18□□□□□ -2.06
RPL3P39023 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.18□□□□□ -2.06
RPL3P39023 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.18□□□□□ -2.06
RPL3P39023 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.18□□□□□ -2.06
RPL3P39023 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.18□□□□□ -2.06
RPL3P39023 AL109918.3-201ENST00000603072 338 ntBASIC2.18□□□□□ -2.06
RPL3P39023 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.18□□□□□ -2.06
RPL3P39023 MIR376A1-201ENST00000616574 68 ntBASIC2.18□□□□□ -2.06
RPL3P39023 7SK.10-201ENST00000621414 298 ntBASIC2.18□□□□□ -2.06
RPL3P39023 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.18□□□□□ -2.06
RPL3P39023 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
RPL3P39023 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPL3P39023 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.17□□□□□ -2.06
RPL3P39023 snoU2_19.2-201ENST00000363024 80 ntBASIC2.17□□□□□ -2.06
RPL3P39023 RNU6-626P-201ENST00000363354 107 ntBASIC2.17□□□□□ -2.06
RPL3P39023 SNORA25B-201ENST00000365507 128 ntBASIC2.17□□□□□ -2.06
RPL3P39023 Y_RNA.396-201ENST00000383949 103 ntBASIC2.17□□□□□ -2.06
RPL3P39023 RNU6-463P-201ENST00000384340 107 ntBASIC2.17□□□□□ -2.06
RPL3P39023 RNU6-102P-201ENST00000384485 104 ntBASIC2.17□□□□□ -2.06
RPL3P39023 MIR586-201ENST00000385035 97 ntBASIC2.17□□□□□ -2.06
RPL3P39023 MIR548B-201ENST00000385247 97 ntBASIC2.17□□□□□ -2.06
RPL3P39023 MIR1283-1-201ENST00000408494 87 ntBASIC2.17□□□□□ -2.06
RPL3P39023 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.17□□□□□ -2.06
RPL3P39023 HMGN2P18-201ENST00000450680 270 ntBASIC2.17□□□□□ -2.06
RPL3P39023 RNU7-26P-201ENST00000458980 63 ntBASIC2.17□□□□□ -2.06
RPL3P39023 AP001486.1-201ENST00000463339 476 ntBASIC2.17□□□□□ -2.06
RPL3P39023 RNU6-667P-201ENST00000517186 102 ntBASIC2.17□□□□□ -2.06
RPL3P39023 CYCSP23-201ENST00000519781 313 ntBASIC2.17□□□□□ -2.06
RPL3P39023 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.17□□□□□ -2.06
RPL3P39023 AP003733.2-201ENST00000529409 171 ntBASIC2.17□□□□□ -2.06
RPL3P39023 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.17□□□□□ -2.06
RPL3P39023 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.17□□□□□ -2.06
RPL3P39023 MIR8062-201ENST00000621515 85 ntBASIC2.17□□□□□ -2.06
RPL3P39023 LINC02555-201ENST00000563933 1951 ntBASIC2.17□□□□□ -2.06
RPL3P39023 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPL3P39023 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.17□□□□□ -2.06
RPL3P39023 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.16□□□□□ -2.06
RPL3P39023 RNU6-454P-201ENST00000364292 107 ntBASIC2.16□□□□□ -2.06
RPL3P39023 RNU6-1305P-201ENST00000364353 104 ntBASIC2.16□□□□□ -2.06
RPL3P39023 SNORD31B-201ENST00000364977 69 ntBASIC2.16□□□□□ -2.06
RPL3P39023 RNU6-196P-201ENST00000384315 107 ntBASIC2.16□□□□□ -2.06
RPL3P39023 Y_RNA.570-201ENST00000384750 101 ntBASIC2.16□□□□□ -2.06
RPL3P39023 MIR561-201ENST00000385216 97 ntBASIC2.16□□□□□ -2.06
RPL3P39023 MT-TW-201ENST00000387382 68 ntBASIC2.16□□□□□ -2.06
RPL3P39023 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.16□□□□□ -2.06
RPL3P39023 AC108938.1-201ENST00000451204 136 ntBASIC2.16□□□□□ -2.06
RPL3P39023 AC016925.1-201ENST00000458303 298 ntBASIC2.16□□□□□ -2.06
RPL3P39023 RN7SL636P-201ENST00000497504 294 ntBASIC2.16□□□□□ -2.06
RPL3P39023 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.16□□□□□ -2.06
RPL3P39023 RNU6-991P-201ENST00000516168 107 ntBASIC2.16□□□□□ -2.06
RPL3P39023 Y_RNA.713-201ENST00000517013 96 ntBASIC2.16□□□□□ -2.06
RPL3P39023 RNA5SP490-201ENST00000517141 136 ntBASIC2.16□□□□□ -2.06
RPL3P39023 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.16□□□□□ -2.06
RPL3P39023 AL161670.1-201ENST00000554348 137 ntBASIC2.16□□□□□ -2.06
RPL3P39023 MIR5194-201ENST00000582634 120 ntBASIC2.16□□□□□ -2.06
RPL3P39023 MIR6132-201ENST00000622083 109 ntBASIC2.16□□□□□ -2.06
RPL3P39023 AC091932.3-201ENST00000624223 323 ntBASIC2.16□□□□□ -2.06
RPL3P39023 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RPL3P39023 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
RPL3P39023 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RPL3P39023 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.06
RPL3P39023 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.15□□□□□ -2.06
RPL3P39023 MIR340-201ENST00000362125 95 ntBASIC2.15□□□□□ -2.07
RPL3P39023 MIR410-201ENST00000362222 80 ntBASIC2.15□□□□□ -2.07
RPL3P39023 Y_RNA.101-201ENST00000363154 102 ntBASIC2.15□□□□□ -2.07
RPL3P39023 Y_RNA.193-201ENST00000363979 102 ntBASIC2.15□□□□□ -2.07
RPL3P39023 Y_RNA.286-201ENST00000364813 102 ntBASIC2.15□□□□□ -2.07
RPL3P39023 SNORD63-201ENST00000384262 68 ntBASIC2.15□□□□□ -2.07
RPL3P39023 Y_RNA.498-201ENST00000384460 102 ntBASIC2.15□□□□□ -2.07
RPL3P39023 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
RPL3P39023 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.15□□□□□ -2.07
RPL3P39023 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.15□□□□□ -2.07
RPL3P39023 U4atac.1-201ENST00000618345 95 ntBASIC2.15□□□□□ -2.07
RPL3P39023 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RPL3P39023 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RPL3P39023 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.15□□□□□ -2.07
RPL3P39023 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RPL3P39023 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms