Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 RNA5SP57-201ENST00000459463 123 ntBASIC1.57□□□□□ -2.16
USP6P35125 Y_RNA.682-201ENST00000516457 100 ntBASIC1.57□□□□□ -2.16
USP6P35125 MTND4LP26-201ENST00000518144 282 ntBASIC1.57□□□□□ -2.16
USP6P35125 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.57□□□□□ -2.16
USP6P35125 AC019176.1-201ENST00000518519 225 ntBASIC1.57□□□□□ -2.16
USP6P35125 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.57□□□□□ -2.16
USP6P35125 AC005034.5-201ENST00000604219 466 ntBASIC1.57□□□□□ -2.16
USP6P35125 AL627230.6-201ENST00000611129 280 ntBASIC1.57□□□□□ -2.16
USP6P35125 AC084782.3-201ENST00000612282 578 ntBASIC1.57□□□□□ -2.16
USP6P35125 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.56□□□□□ -2.16
USP6P35125 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
USP6P35125 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USP6P35125 RNY1P4-201ENST00000384595 115 ntBASIC1.56□□□□□ -2.16
USP6P35125 MIR32-201ENST00000384965 70 ntBASIC1.56□□□□□ -2.16
USP6P35125 RNU6-510P-201ENST00000391239 108 ntBASIC1.56□□□□□ -2.16
USP6P35125 RNU1-139P-201ENST00000391307 165 ntBASIC1.56□□□□□ -2.16
USP6P35125 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.56□□□□□ -2.16
USP6P35125 AC004866.1-201ENST00000411748 78 ntBASIC1.56□□□□□ -2.16
USP6P35125 AC244636.1-201ENST00000421152 228 ntBASIC1.56□□□□□ -2.16
USP6P35125 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.56□□□□□ -2.16
USP6P35125 MRPS17P9-201ENST00000511924 393 ntBASIC1.56□□□□□ -2.16
USP6P35125 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.56□□□□□ -2.16
USP6P35125 RNA5SP436-201ENST00000516020 115 ntBASIC1.56□□□□□ -2.16
USP6P35125 MIR6128-201ENST00000615528 109 ntBASIC1.56□□□□□ -2.16
USP6P35125 AC137590.2-201ENST00000619709 240 ntBASIC1.56□□□□□ -2.16
USP6P35125 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.56□□□□□ -2.16
USP6P35125 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
USP6P35125 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.55□□□□□ -2.16
USP6P35125 RPL30P16-201ENST00000419341 429 ntBASIC1.55□□□□□ -2.16
USP6P35125 EIF4EP2-201ENST00000422816 654 ntBASIC1.55□□□□□ -2.16
USP6P35125 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.55□□□□□ -2.16
USP6P35125 AC010531.2-201ENST00000465012 153 ntBASIC1.55□□□□□ -2.16
USP6P35125 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.55□□□□□ -2.16
USP6P35125 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.55□□□□□ -2.16
USP6P35125 RNU6-358P-201ENST00000516564 75 ntBASIC1.55□□□□□ -2.16
USP6P35125 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.55□□□□□ -2.16
USP6P35125 RRN3P3-201ENST00000549207 578 ntBASIC1.55□□□□□ -2.16
USP6P35125 MIR5696-201ENST00000578474 85 ntBASIC1.55□□□□□ -2.16
USP6P35125 MIR4273-201ENST00000582824 84 ntBASIC1.55□□□□□ -2.16
USP6P35125 SNRPGP20-201ENST00000604477 205 ntBASIC1.55□□□□□ -2.16
USP6P35125 AC022513.1-201ENST00000624512 117 ntBASIC1.55□□□□□ -2.16
USP6P35125 MTND5P9-201ENST00000503854 1755 ntBASIC1.54□□□□□ -2.16
USP6P35125 ZNF204P-201ENST00000416749 2397 ntBASIC1.54□□□□□ -2.16
USP6P35125 AL159152.1-201ENST00000635019 2587 ntBASIC1.54□□□□□ -2.16
USP6P35125 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
USP6P35125 SNORA48.1-201ENST00000390879 135 ntBASIC1.54□□□□□ -2.16
USP6P35125 USP9YP30-201ENST00000430729 455 ntBASIC1.54□□□□□ -2.16
USP6P35125 HMGN1P33-201ENST00000432945 451 ntBASIC1.54□□□□□ -2.16
USP6P35125 MTATP6P13-201ENST00000438531 667 ntBASIC1.54□□□□□ -2.16
USP6P35125 MTND1P17-201ENST00000448961 204 ntBASIC1.54□□□□□ -2.16
USP6P35125 snoU13.30-201ENST00000458951 104 ntBASIC1.54□□□□□ -2.16
USP6P35125 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.54□□□□□ -2.16
USP6P35125 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.54□□□□□ -2.16
USP6P35125 AC026470.2-201ENST00000561492 181 ntBASIC1.54□□□□□ -2.16
USP6P35125 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.54□□□□□ -2.16
USP6P35125 AL096840.1-201ENST00000603287 93 ntBASIC1.54□□□□□ -2.16
USP6P35125 AC092794.1-201ENST00000612734 582 ntBASIC1.54□□□□□ -2.16
USP6P35125 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.54□□□□□ -2.16
USP6P35125 SCARNA4-201ENST00000629045 128 ntBASIC1.54□□□□□ -2.16
USP6P35125 BX322639.1-202ENST00000423987 2213 ntBASIC1.54□□□□□ -2.16
USP6P35125 RNU6-1059P-201ENST00000363752 98 ntBASIC1.53□□□□□ -2.16
USP6P35125 RNU4-9P-201ENST00000364951 139 ntBASIC1.53□□□□□ -2.16
USP6P35125 MIR300-201ENST00000401138 83 ntBASIC1.53□□□□□ -2.16
USP6P35125 MIR1283-1-201ENST00000408494 87 ntBASIC1.53□□□□□ -2.16
USP6P35125 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
USP6P35125 MTCO3P46-201ENST00000425787 232 ntBASIC1.53□□□□□ -2.16
USP6P35125 FGF7P6-202ENST00000451282 293 ntBASIC1.53□□□□□ -2.16
USP6P35125 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.53□□□□□ -2.16
USP6P35125 AC097473.1-201ENST00000508142 408 ntBASIC1.53□□□□□ -2.16
USP6P35125 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.53□□□□□ -2.16
USP6P35125 RNU6-113P-201ENST00000516653 101 ntBASIC1.53□□□□□ -2.16
USP6P35125 RNU1-54P-201ENST00000517181 120 ntBASIC1.53□□□□□ -2.16
USP6P35125 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.53□□□□□ -2.16
USP6P35125 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.53□□□□□ -2.16
USP6P35125 MIR4790-201ENST00000577799 79 ntBASIC1.53□□□□□ -2.16
USP6P35125 SNORA59B-202ENST00000578183 701 ntBASIC1.53□□□□□ -2.16
USP6P35125 MIR4742-201ENST00000581069 85 ntBASIC1.53□□□□□ -2.16
USP6P35125 AC005786.1-201ENST00000588553 154 ntBASIC1.53□□□□□ -2.16
USP6P35125 AC008133.2-201ENST00000624540 351 ntBASIC1.53□□□□□ -2.16
USP6P35125 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.53□□□□□ -2.16
USP6P35125 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.52□□□□□ -2.17
USP6P35125 RNU6-842P-201ENST00000384269 107 ntBASIC1.52□□□□□ -2.17
USP6P35125 Y_RNA.505-201ENST00000384489 102 ntBASIC1.52□□□□□ -2.17
USP6P35125 Y_RNA.533-201ENST00000384596 114 ntBASIC1.52□□□□□ -2.17
USP6P35125 RNA5SP100-201ENST00000410903 110 ntBASIC1.52□□□□□ -2.17
USP6P35125 RNA5SP59-201ENST00000410922 110 ntBASIC1.52□□□□□ -2.17
USP6P35125 MTND3P8-201ENST00000412909 339 ntBASIC1.52□□□□□ -2.17
USP6P35125 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.52□□□□□ -2.17
USP6P35125 AL445305.1-201ENST00000432577 575 ntBASIC1.52□□□□□ -2.17
USP6P35125 AC016717.1-201ENST00000448918 286 ntBASIC1.52□□□□□ -2.17
USP6P35125 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.52□□□□□ -2.17
USP6P35125 AC087343.1-201ENST00000477341 475 ntBASIC1.52□□□□□ -2.17
USP6P35125 AC082651.2-201ENST00000496833 166 ntBASIC1.52□□□□□ -2.17
USP6P35125 AC018710.1-201ENST00000506509 158 ntBASIC1.52□□□□□ -2.17
USP6P35125 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.52□□□□□ -2.17
USP6P35125 RNU6-58P-201ENST00000517143 103 ntBASIC1.52□□□□□ -2.17
USP6P35125 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.52□□□□□ -2.17
USP6P35125 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.52□□□□□ -2.17
USP6P35125 MIR4753-201ENST00000585119 83 ntBASIC1.52□□□□□ -2.17
USP6P35125 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms