Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 SUMO2P16-201ENST00000519475 264 ntBASIC0.91□□□□□ -2.26
USF1P22415 OSBPL9P5-201ENST00000542581 171 ntBASIC0.91□□□□□ -2.26
USF1P22415 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.91□□□□□ -2.26
USF1P22415 AC119751.7-201ENST00000600494 245 ntBASIC0.91□□□□□ -2.26
USF1P22415 HSPE1P19-201ENST00000603327 295 ntBASIC0.91□□□□□ -2.26
USF1P22415 SNORD11B-201ENST00000607707 90 ntBASIC0.91□□□□□ -2.26
USF1P22415 AC022709.1-201ENST00000615967 87 ntBASIC0.91□□□□□ -2.26
USF1P22415 MIR6515-201ENST00000619843 57 ntBASIC0.91□□□□□ -2.26
USF1P22415 AC073534.2-201ENST00000620377 381 ntBASIC0.91□□□□□ -2.26
USF1P22415 AP000770.2-201ENST00000623694 100 ntBASIC0.91□□□□□ -2.26
USF1P22415 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
USF1P22415 Y_RNA.112-201ENST00000363250 102 ntBASIC0.9□□□□□ -2.27
USF1P22415 Y_RNA.167-201ENST00000363735 109 ntBASIC0.9□□□□□ -2.27
USF1P22415 MIR514A2-201ENST00000385131 88 ntBASIC0.9□□□□□ -2.27
USF1P22415 MIR514A3-201ENST00000385132 88 ntBASIC0.9□□□□□ -2.27
USF1P22415 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
USF1P22415 AL356776.1-201ENST00000406574 447 ntBASIC0.9□□□□□ -2.27
USF1P22415 MIR548J-201ENST00000408833 112 ntBASIC0.9□□□□□ -2.27
USF1P22415 AC010154.1-201ENST00000425857 269 ntBASIC0.9□□□□□ -2.27
USF1P22415 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.9□□□□□ -2.27
USF1P22415 AL606517.2-201ENST00000442855 241 ntBASIC0.9□□□□□ -2.27
USF1P22415 RNU6-1198P-201ENST00000516904 67 ntBASIC0.9□□□□□ -2.27
USF1P22415 MTND1P5-201ENST00000517906 940 ntBASIC0.9□□□□□ -2.27
USF1P22415 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.9□□□□□ -2.27
USF1P22415 AC026371.1-201ENST00000551867 419 ntBASIC0.9□□□□□ -2.27
USF1P22415 AL133215.3-201ENST00000609801 448 ntBASIC0.9□□□□□ -2.27
USF1P22415 U6.108-201ENST00000637764 58 ntBASIC0.9□□□□□ -2.27
USF1P22415 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
USF1P22415 Y_RNA.77-201ENST00000362962 107 ntBASIC0.89□□□□□ -2.27
USF1P22415 SNORD115-8-201ENST00000363856 82 ntBASIC0.89□□□□□ -2.27
USF1P22415 SNORD115-38-201ENST00000365037 82 ntBASIC0.89□□□□□ -2.27
USF1P22415 SNORA25-201ENST00000384384 134 ntBASIC0.89□□□□□ -2.27
USF1P22415 MTCO1P20-201ENST00000425366 358 ntBASIC0.89□□□□□ -2.27
USF1P22415 AC103851.1-201ENST00000506833 274 ntBASIC0.89□□□□□ -2.27
USF1P22415 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.89□□□□□ -2.27
USF1P22415 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.89□□□□□ -2.27
USF1P22415 SNORD116-28-201ENST00000516123 91 ntBASIC0.89□□□□□ -2.27
USF1P22415 SNORA31.10-201ENST00000516482 106 ntBASIC0.89□□□□□ -2.27
USF1P22415 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.89□□□□□ -2.27
USF1P22415 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.89□□□□□ -2.27
USF1P22415 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.89□□□□□ -2.27
USF1P22415 AC022217.4-201ENST00000604389 163 ntBASIC0.89□□□□□ -2.27
USF1P22415 BX284668.6-201ENST00000606899 438 ntBASIC0.89□□□□□ -2.27
USF1P22415 AC004492.1-201ENST00000607036 742 ntBASIC0.89□□□□□ -2.27
USF1P22415 AC027335.2-201ENST00000624030 375 ntBASIC0.89□□□□□ -2.27
USF1P22415 MIR6767-201ENST00000637302 66 ntBASIC0.89□□□□□ -2.27
USF1P22415 AC068647.2-201ENST00000637380 353 ntBASIC0.89□□□□□ -2.27
USF1P22415 ELL2P3-201ENST00000457883 1602 ntBASIC0.89□□□□□ -2.27
USF1P22415 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
USF1P22415 RNU1-124P-201ENST00000363861 145 ntBASIC0.88□□□□□ -2.27
USF1P22415 MIR487A-201ENST00000385009 80 ntBASIC0.88□□□□□ -2.27
USF1P22415 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
USF1P22415 RNA5SP504-201ENST00000410676 117 ntBASIC0.88□□□□□ -2.27
USF1P22415 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.88□□□□□ -2.27
USF1P22415 AL353572.1-201ENST00000442490 417 ntBASIC0.88□□□□□ -2.27
USF1P22415 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.88□□□□□ -2.27
USF1P22415 NDUFB4P10-201ENST00000452541 359 ntBASIC0.88□□□□□ -2.27
USF1P22415 AC010424.1-201ENST00000506336 297 ntBASIC0.88□□□□□ -2.27
USF1P22415 RNU6-835P-201ENST00000516974 104 ntBASIC0.88□□□□□ -2.27
USF1P22415 CYCSP23-201ENST00000519781 313 ntBASIC0.88□□□□□ -2.27
USF1P22415 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.88□□□□□ -2.27
USF1P22415 AC006362.1-201ENST00000567392 174 ntBASIC0.88□□□□□ -2.27
USF1P22415 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.88□□□□□ -2.27
USF1P22415 AL390123.1-201ENST00000603216 237 ntBASIC0.88□□□□□ -2.27
USF1P22415 AL022345.2-201ENST00000606307 135 ntBASIC0.88□□□□□ -2.27
USF1P22415 FAM157A-202ENST00000615155 405 ntBASIC0.88□□□□□ -2.27
USF1P22415 MIR8054-201ENST00000620877 86 ntBASIC0.88□□□□□ -2.27
USF1P22415 SNORD113-7-201ENST00000363762 77 ntBASIC0.87□□□□□ -2.27
USF1P22415 Y_RNA.359-201ENST00000365498 102 ntBASIC0.87□□□□□ -2.27
USF1P22415 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.87□□□□□ -2.27
USF1P22415 RNU6-128P-201ENST00000383976 107 ntBASIC0.87□□□□□ -2.27
USF1P22415 Y_RNA.409-201ENST00000383990 98 ntBASIC0.87□□□□□ -2.27
USF1P22415 CALM2P3-201ENST00000400429 449 ntBASIC0.87□□□□□ -2.27
USF1P22415 MRPL42P3-201ENST00000401492 326 ntBASIC0.87□□□□□ -2.27
USF1P22415 RNU6-648P-201ENST00000410190 107 ntBASIC0.87□□□□□ -2.27
USF1P22415 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.87□□□□□ -2.27
USF1P22415 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.87□□□□□ -2.27
USF1P22415 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
USF1P22415 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.87□□□□□ -2.27
USF1P22415 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.87□□□□□ -2.27
USF1P22415 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.87□□□□□ -2.27
USF1P22415 AC004584.2-201ENST00000570407 410 ntBASIC0.87□□□□□ -2.27
USF1P22415 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
USF1P22415 AC097520.1-201ENST00000624435 385 ntBASIC0.87□□□□□ -2.27
USF1P22415 AC090582.1-201ENST00000636321 199 ntBASIC0.87□□□□□ -2.27
USF1P22415 MIR3974-201ENST00000637126 96 ntBASIC0.87□□□□□ -2.27
USF1P22415 SNORD50.1-201ENST00000362987 71 ntBASIC0.86□□□□□ -2.27
USF1P22415 RNU6-1085P-201ENST00000363576 107 ntBASIC0.86□□□□□ -2.27
USF1P22415 U3.8-201ENST00000363675 217 ntBASIC0.86□□□□□ -2.27
USF1P22415 SNORD115-32-201ENST00000364079 82 ntBASIC0.86□□□□□ -2.27
USF1P22415 Y_RNA.231-201ENST00000364358 102 ntBASIC0.86□□□□□ -2.27
USF1P22415 RNU4-9P-201ENST00000364951 139 ntBASIC0.86□□□□□ -2.27
USF1P22415 Y_RNA.354-201ENST00000365448 111 ntBASIC0.86□□□□□ -2.27
USF1P22415 RNU6-440P-201ENST00000390882 105 ntBASIC0.86□□□□□ -2.27
USF1P22415 AL590002.1-201ENST00000406554 418 ntBASIC0.86□□□□□ -2.27
USF1P22415 AC245047.3-201ENST00000429428 127 ntBASIC0.86□□□□□ -2.27
USF1P22415 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.86□□□□□ -2.27
USF1P22415 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.86□□□□□ -2.27
USF1P22415 RNU6-165P-201ENST00000517170 99 ntBASIC0.86□□□□□ -2.27
USF1P22415 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms