Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM21P19474 AC004584.2-201ENST00000570407 410 ntBASIC1.93□□□□□ -2.1
TRIM21P19474 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.93□□□□□ -2.1
TRIM21P19474 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.93□□□□□ -2.1
TRIM21P19474 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.93□□□□□ -2.1
TRIM21P19474 AL359757.2-201ENST00000624309 274 ntBASIC1.93□□□□□ -2.1
TRIM21P19474 MTND5P16-201ENST00000460269 1703 ntBASIC1.93□□□□□ -2.1
TRIM21P19474 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
TRIM21P19474 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
TRIM21P19474 U3.8-201ENST00000363675 217 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 RNU6-1188P-201ENST00000363795 107 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 SNORD48-201ENST00000364953 64 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 Y_RNA.474-201ENST00000384341 102 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 RNU6-1297P-201ENST00000384415 104 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 RNU6-1009P-201ENST00000390996 107 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.92□□□□□ -2.1
TRIM21P19474 AC016717.1-201ENST00000448918 286 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 Y_RNA.653-201ENST00000459091 95 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 CYCSP23-201ENST00000519781 313 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.92□□□□□ -2.1
TRIM21P19474 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.92□□□□□ -2.1
TRIM21P19474 snoZ196.1-201ENST00000625269 89 ntBASIC1.92□□□□□ -2.1
TRIM21P19474 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.92□□□□□ -2.1
TRIM21P19474 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM21P19474 RNU6-727P-201ENST00000363592 107 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 RPS20P15-201ENST00000412792 311 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 AC008134.1-201ENST00000420943 193 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM21P19474 AC092423.1-201ENST00000430165 186 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 RPS29P11-201ENST00000496507 171 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 AC091951.2-201ENST00000500762 203 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM21P19474 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.91□□□□□ -2.1
TRIM21P19474 RNVU1-2-201ENST00000516326 135 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 Y_RNA.683-201ENST00000516508 93 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 RNU6-1213P-201ENST00000517075 94 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 RNU6-548P-201ENST00000517083 115 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 MIR502-201ENST00000606349 86 ntBASIC1.91□□□□□ -2.1
TRIM21P19474 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.91□□□□□ -2.1
TRIM21P19474 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM21P19474 AL356292.1-201ENST00000283110 373 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 RNU6-222P-201ENST00000362438 107 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 Y_RNA.303-201ENST00000364998 94 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 RNU6-281P-201ENST00000384212 103 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 RNU6-310P-201ENST00000384655 107 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 SNORA75.6-201ENST00000391318 127 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 MTCYBP4-201ENST00000401524 249 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 RNU6-57P-201ENST00000411348 103 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 AC091179.3-201ENST00000474761 144 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.9□□□□□ -2.11
TRIM21P19474 RNU6-1041P-201ENST00000516254 102 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 Y_RNA.702-201ENST00000516843 96 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 AC091144.1-201ENST00000519573 138 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 APOOP3-201ENST00000536787 586 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 AC093023.1-201ENST00000547375 507 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 HSBP1P1-201ENST00000555205 166 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 DEFB122-202ENST00000569013 197 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 AC104984.5-201ENST00000586878 94 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 AL353149.1-201ENST00000610667 244 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 AC084768.2-201ENST00000622736 221 ntBASIC1.9□□□□□ -2.11
TRIM21P19474 MTND5P35-201ENST00000557537 1720 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 RNU4-42P-201ENST00000364738 142 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 Y_RNA.577-201ENST00000384794 101 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 MIR625-201ENST00000385047 85 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 MIR1253-201ENST00000408273 105 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 Y_RNA.646-201ENST00000410980 101 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 AC060773.1-201ENST00000421698 310 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 RPL30P15-201ENST00000457129 321 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 RPL23AP63-201ENST00000498752 471 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM21P19474 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 RNU6-875P-201ENST00000516488 106 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 FRG2DP-202ENST00000566967 323 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 MIR5094-201ENST00000578766 85 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 AC069114.2-201ENST00000604699 304 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 MIR6845-201ENST00000613182 61 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 MIR1302-1-201ENST00000637932 143 ntBASIC1.89□□□□□ -2.11
TRIM21P19474 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRIM21P19474 RNU6-862P-201ENST00000362804 105 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 Y_RNA.70-201ENST00000362886 110 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 RNU1-96P-201ENST00000364163 162 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 Y_RNA.259-201ENST00000364619 101 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 SNORD87-201ENST00000364849 89 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 Y_RNA.415-201ENST00000384012 112 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 Y_RNA.595-201ENST00000410403 105 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 RNA5SP504-201ENST00000410676 117 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 RNU6-1304P-201ENST00000411374 106 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 AC009310.1-201ENST00000414414 451 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 EIF1P2-201ENST00000428233 350 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 AC007677.1-201ENST00000445757 515 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 MIR2053-201ENST00000459295 91 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 RNU6-221P-201ENST00000459541 99 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 MIR2355-201ENST00000517199 87 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 CBX3P4-201ENST00000538909 354 ntBASIC1.88□□□□□ -2.11
TRIM21P19474 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.88□□□□□ -2.11
TRIM21P19474 SUB1P3-201ENST00000564581 315 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms