Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 U3.8-201ENST00000363675 217 ntBASIC1.53□□□□□ -2.16
VCLP18206 Y_RNA.301-201ENST00000364990 103 ntBASIC1.53□□□□□ -2.16
VCLP18206 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VCLP18206 RNU6-793P-201ENST00000384233 104 ntBASIC1.53□□□□□ -2.16
VCLP18206 AL445305.1-201ENST00000432577 575 ntBASIC1.53□□□□□ -2.16
VCLP18206 MTND4P12-201ENST00000498999 1377 ntBASIC1.53□□□□□ -2.16
VCLP18206 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.53□□□□□ -2.16
VCLP18206 AC018638.8-201ENST00000588755 281 ntBASIC1.53□□□□□ -2.16
VCLP18206 AC002553.4-201ENST00000616896 331 ntBASIC1.53□□□□□ -2.16
VCLP18206 MIR8063-201ENST00000621930 81 ntBASIC1.53□□□□□ -2.16
VCLP18206 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.53□□□□□ -2.16
VCLP18206 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
VCLP18206 Y_RNA.179-201ENST00000363844 90 ntBASIC1.52□□□□□ -2.17
VCLP18206 RNU6-595P-201ENST00000363944 107 ntBASIC1.52□□□□□ -2.17
VCLP18206 SNORD87-201ENST00000364849 89 ntBASIC1.52□□□□□ -2.17
VCLP18206 Y_RNA.287-201ENST00000364853 94 ntBASIC1.52□□□□□ -2.17
VCLP18206 MIR548B-201ENST00000385247 97 ntBASIC1.52□□□□□ -2.17
VCLP18206 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
VCLP18206 RNA5SP213-201ENST00000391031 106 ntBASIC1.52□□□□□ -2.17
VCLP18206 RNA5SP504-201ENST00000410676 117 ntBASIC1.52□□□□□ -2.17
VCLP18206 USP9YP30-201ENST00000430729 455 ntBASIC1.52□□□□□ -2.17
VCLP18206 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.52□□□□□ -2.17
VCLP18206 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
VCLP18206 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.52□□□□□ -2.17
VCLP18206 AC103851.1-201ENST00000506833 274 ntBASIC1.52□□□□□ -2.17
VCLP18206 RNA5SP458-201ENST00000516188 119 ntBASIC1.52□□□□□ -2.17
VCLP18206 Y_RNA.682-201ENST00000516457 100 ntBASIC1.52□□□□□ -2.17
VCLP18206 RNU1-142P-201ENST00000516682 145 ntBASIC1.52□□□□□ -2.17
VCLP18206 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
VCLP18206 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.52□□□□□ -2.17
VCLP18206 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.52□□□□□ -2.17
VCLP18206 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VCLP18206 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
VCLP18206 RNU6-1266P-201ENST00000362794 105 ntBASIC1.51□□□□□ -2.17
VCLP18206 Y_RNA.140-201ENST00000363474 103 ntBASIC1.51□□□□□ -2.17
VCLP18206 RNU6-727P-201ENST00000363592 107 ntBASIC1.51□□□□□ -2.17
VCLP18206 RNU6-271P-201ENST00000363858 105 ntBASIC1.51□□□□□ -2.17
VCLP18206 Y_RNA.405-201ENST00000383979 100 ntBASIC1.51□□□□□ -2.17
VCLP18206 Y_RNA.451-201ENST00000384200 100 ntBASIC1.51□□□□□ -2.17
VCLP18206 Y_RNA.524-201ENST00000384564 100 ntBASIC1.51□□□□□ -2.17
VCLP18206 Y_RNA.561-201ENST00000384694 100 ntBASIC1.51□□□□□ -2.17
VCLP18206 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
VCLP18206 RNA5SP467-201ENST00000391274 118 ntBASIC1.51□□□□□ -2.17
VCLP18206 AL356776.1-201ENST00000406574 447 ntBASIC1.51□□□□□ -2.17
VCLP18206 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
VCLP18206 SNORD5.1-201ENST00000458800 75 ntBASIC1.51□□□□□ -2.17
VCLP18206 AC011352.1-201ENST00000512300 793 ntBASIC1.51□□□□□ -2.17
VCLP18206 Y_RNA.675-201ENST00000516389 149 ntBASIC1.51□□□□□ -2.17
VCLP18206 Y_RNA.706-201ENST00000516933 99 ntBASIC1.51□□□□□ -2.17
VCLP18206 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.51□□□□□ -2.17
VCLP18206 UBL5P4-201ENST00000562584 236 ntBASIC1.51□□□□□ -2.17
VCLP18206 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VCLP18206 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VCLP18206 SNORD33-201ENST00000362761 85 ntBASIC1.5□□□□□ -2.17
VCLP18206 Y_RNA.86-201ENST00000363020 111 ntBASIC1.5□□□□□ -2.17
VCLP18206 RNU6-60P-201ENST00000364792 103 ntBASIC1.5□□□□□ -2.17
VCLP18206 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.5□□□□□ -2.17
VCLP18206 MIR1185-2-201ENST00000408687 86 ntBASIC1.5□□□□□ -2.17
VCLP18206 EIF1P1-201ENST00000421436 341 ntBASIC1.5□□□□□ -2.17
VCLP18206 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.5□□□□□ -2.17
VCLP18206 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.5□□□□□ -2.17
VCLP18206 RNU6-329P-201ENST00000459618 107 ntBASIC1.5□□□□□ -2.17
VCLP18206 AP000870.1-201ENST00000472927 406 ntBASIC1.5□□□□□ -2.17
VCLP18206 AC091179.3-201ENST00000474761 144 ntBASIC1.5□□□□□ -2.17
VCLP18206 HMGN1P12-201ENST00000499125 195 ntBASIC1.5□□□□□ -2.17
VCLP18206 AF235103.2-201ENST00000525753 346 ntBASIC1.5□□□□□ -2.17
VCLP18206 AL160236.1-201ENST00000556317 195 ntBASIC1.5□□□□□ -2.17
VCLP18206 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.5□□□□□ -2.17
VCLP18206 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.5□□□□□ -2.17
VCLP18206 MIR4709-201ENST00000577272 72 ntBASIC1.5□□□□□ -2.17
VCLP18206 AC100812.1-201ENST00000607622 580 ntBASIC1.5□□□□□ -2.17
VCLP18206 AL359075.3-201ENST00000613288 217 ntBASIC1.5□□□□□ -2.17
VCLP18206 AC007014.2-201ENST00000615581 479 ntBASIC1.5□□□□□ -2.17
VCLP18206 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.5□□□□□ -2.17
VCLP18206 SNORA33-201ENST00000363664 130 ntBASIC1.49□□□□□ -2.17
VCLP18206 RNU6-1059P-201ENST00000363752 98 ntBASIC1.49□□□□□ -2.17
VCLP18206 RNU6-457P-201ENST00000363999 107 ntBASIC1.49□□□□□ -2.17
VCLP18206 SNORD1A-201ENST00000364968 72 ntBASIC1.49□□□□□ -2.17
VCLP18206 Y_RNA.415-201ENST00000384012 112 ntBASIC1.49□□□□□ -2.17
VCLP18206 RNU6-950P-201ENST00000384651 107 ntBASIC1.49□□□□□ -2.17
VCLP18206 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
VCLP18206 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.49□□□□□ -2.17
VCLP18206 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
VCLP18206 FCF1P9-201ENST00000412546 282 ntBASIC1.49□□□□□ -2.17
VCLP18206 AC016909.1-201ENST00000415916 166 ntBASIC1.49□□□□□ -2.17
VCLP18206 AC245517.4-201ENST00000448601 281 ntBASIC1.49□□□□□ -2.17
VCLP18206 AL163195.1-201ENST00000496941 348 ntBASIC1.49□□□□□ -2.17
VCLP18206 AC079140.2-201ENST00000506193 142 ntBASIC1.49□□□□□ -2.17
VCLP18206 AC093303.1-201ENST00000514549 295 ntBASIC1.49□□□□□ -2.17
VCLP18206 AC068790.6-201ENST00000602558 258 ntBASIC1.49□□□□□ -2.17
VCLP18206 AP000942.3-201ENST00000603702 160 ntBASIC1.49□□□□□ -2.17
VCLP18206 BNIP3P10-201ENST00000605360 577 ntBASIC1.49□□□□□ -2.17
VCLP18206 AL512598.1-201ENST00000610158 273 ntBASIC1.49□□□□□ -2.17
VCLP18206 AC010999.1-201ENST00000611856 324 ntBASIC1.49□□□□□ -2.17
VCLP18206 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.49□□□□□ -2.17
VCLP18206 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
VCLP18206 AC139792.2-201ENST00000624218 587 ntBASIC1.49□□□□□ -2.17
VCLP18206 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
VCLP18206 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
VCLP18206 AC027514.1-201ENST00000588561 1603 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 289.6 ms