Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.75□□□□□ -2.13
ERCC2P18074 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.75□□□□□ -2.13
ERCC2P18074 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.75□□□□□ -2.13
ERCC2P18074 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.75□□□□□ -2.13
ERCC2P18074 MTND4P17-201ENST00000470444 350 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 Y_RNA.708-201ENST00000516950 96 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 AC025647.1-201ENST00000517879 253 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 AK6P2-201ENST00000549020 471 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 MIR5695-201ENST00000579717 85 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 AC005014.2-201ENST00000607795 599 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 AC009229.3-201ENST00000608056 282 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 AC022306.2-201ENST00000617563 647 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 AC099654.14-201ENST00000638599 341 ntBASIC1.75□□□□□ -2.13
ERCC2P18074 RNU6-222P-201ENST00000362438 107 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 SNORA33-201ENST00000363664 130 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 RNU5F-3P-201ENST00000363767 117 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 Y_RNA.179-201ENST00000363844 90 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 SNORD81.2-201ENST00000365153 76 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 RNU6-417P-201ENST00000384712 107 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 CYCSP49-201ENST00000420810 319 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.74□□□□□ -2.13
ERCC2P18074 HSPE1P9-201ENST00000440046 311 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 MTND3P10-201ENST00000450967 341 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.74□□□□□ -2.13
ERCC2P18074 RNU6-221P-201ENST00000459541 99 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 RPL7P42-201ENST00000481005 679 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.74□□□□□ -2.13
ERCC2P18074 RNU6-1146P-201ENST00000516282 102 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 SNORA44.1-201ENST00000517031 108 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.74□□□□□ -2.13
ERCC2P18074 MIR5701-3-201ENST00000578890 82 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 MIR5701-1-201ENST00000585138 82 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 MZT1P2-201ENST00000604387 248 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 MIR5701-2-201ENST00000615634 82 ntBASIC1.74□□□□□ -2.13
ERCC2P18074 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ERCC2P18074 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
ERCC2P18074 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ERCC2P18074 MIR424-201ENST00000362227 98 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 Y_RNA.106-201ENST00000363189 100 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 SNORA63D-201ENST00000364359 132 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 Y_RNA.287-201ENST00000364853 94 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 AL627390.1-201ENST00000396055 340 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 MIR1253-201ENST00000408273 105 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 AC138393.2-201ENST00000414742 246 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 EBAG9P1-201ENST00000418955 543 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 USP9YP16-201ENST00000430287 407 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 USP9YP23-201ENST00000455085 407 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 HMGN1P13-201ENST00000505795 138 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.73□□□□□ -2.13
ERCC2P18074 Y_RNA.691-201ENST00000516611 103 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 SNORA20.3-201ENST00000516880 132 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 DEFB122-202ENST00000569013 197 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 AC010999.1-201ENST00000611856 324 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 MIR8074-201ENST00000615081 81 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 TPTEP1-208ENST00000636884 213 ntBASIC1.73□□□□□ -2.13
ERCC2P18074 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.72□□□□□ -2.13
ERCC2P18074 U3.8-201ENST00000363675 217 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 Y_RNA.404-201ENST00000383978 102 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 RNU1-139P-201ENST00000391307 165 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 RNU4-14P-201ENST00000410858 122 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 AL353997.1-201ENST00000432936 108 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 AC098614.3-201ENST00000438957 440 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 AC112492.4-201ENST00000456549 352 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 AC005908.1-201ENST00000468701 347 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.72□□□□□ -2.13
ERCC2P18074 HMGN1P12-201ENST00000499125 195 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 AC025465.3-201ENST00000510570 311 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 AC093303.1-201ENST00000514549 295 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 RNU6-1114P-201ENST00000516022 107 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 AC016925.2-201ENST00000605108 242 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 PISRT1.1-201ENST00000616930 107 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.72□□□□□ -2.13
ERCC2P18074 AC099654.5-201ENST00000636479 350 ntBASIC1.72□□□□□ -2.13
ERCC2P18074 MTND5P16-201ENST00000460269 1703 ntBASIC1.71□□□□□ -2.13
ERCC2P18074 RNY1P16-201ENST00000363063 111 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 RNU6-1240P-201ENST00000365155 104 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 RNU6-281P-201ENST00000384212 103 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 RNU6-331P-201ENST00000384724 107 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 RNA5SP467-201ENST00000391274 118 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 SNORA75.4-201ENST00000391278 119 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 MIR190B-201ENST00000401119 79 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 MIR1185-2-201ENST00000408687 86 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 AC008134.1-201ENST00000420943 193 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 NDUFB4P10-201ENST00000452541 359 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.71□□□□□ -2.14
ERCC2P18074 RPL36AP21-201ENST00000490372 323 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.71□□□□□ -2.14
ERCC2P18074 RNU6-1213P-201ENST00000517075 94 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.71□□□□□ -2.14
ERCC2P18074 AL121579.1-201ENST00000555129 305 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 HSBP1P1-201ENST00000555205 166 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
ERCC2P18074 RNU6-414P-201ENST00000363705 104 ntBASIC1.7□□□□□ -2.14
ERCC2P18074 RNU6-360P-201ENST00000390944 104 ntBASIC1.7□□□□□ -2.14
ERCC2P18074 RNA5SP213-201ENST00000391031 106 ntBASIC1.7□□□□□ -2.14
ERCC2P18074 RNU6-700P-201ENST00000391043 107 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms