Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RNA5SP467-201ENST00000391274 118 ntBASIC1.1□□□□□ -2.23
NCK1P16333 RNU4-62P-201ENST00000410125 130 ntBASIC1.1□□□□□ -2.23
NCK1P16333 RNU6-908P-201ENST00000410160 94 ntBASIC1.1□□□□□ -2.23
NCK1P16333 RNU6-321P-201ENST00000410912 106 ntBASIC1.1□□□□□ -2.23
NCK1P16333 RNU6-1068P-201ENST00000410958 103 ntBASIC1.1□□□□□ -2.23
NCK1P16333 AP1B1P2-201ENST00000416196 106 ntBASIC1.1□□□□□ -2.23
NCK1P16333 PCMTD1P1-201ENST00000455560 355 ntBASIC1.1□□□□□ -2.23
NCK1P16333 RNU7-34P-201ENST00000459394 64 ntBASIC1.1□□□□□ -2.23
NCK1P16333 AC083904.1-201ENST00000487828 231 ntBASIC1.1□□□□□ -2.23
NCK1P16333 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
NCK1P16333 SNORD116-28-201ENST00000516123 91 ntBASIC1.1□□□□□ -2.23
NCK1P16333 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.1□□□□□ -2.23
NCK1P16333 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.1□□□□□ -2.23
NCK1P16333 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.1□□□□□ -2.23
NCK1P16333 PIGPP4-201ENST00000584447 307 ntBASIC1.1□□□□□ -2.23
NCK1P16333 AL365434.2-201ENST00000607979 234 ntBASIC1.1□□□□□ -2.23
NCK1P16333 AC021506.2-201ENST00000612354 169 ntBASIC1.1□□□□□ -2.23
NCK1P16333 Y_RNA.100-201ENST00000363141 102 ntBASIC1.09□□□□□ -2.23
NCK1P16333 RNU6-280P-201ENST00000364145 104 ntBASIC1.09□□□□□ -2.23
NCK1P16333 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.09□□□□□ -2.23
NCK1P16333 AL591704.2-201ENST00000421658 181 ntBASIC1.09□□□□□ -2.23
NCK1P16333 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.09□□□□□ -2.23
NCK1P16333 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.09□□□□□ -2.23
NCK1P16333 RNU7-187P-201ENST00000458985 68 ntBASIC1.09□□□□□ -2.23
NCK1P16333 RNU7-94P-201ENST00000459576 63 ntBASIC1.09□□□□□ -2.23
NCK1P16333 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.09□□□□□ -2.23
NCK1P16333 AL137100.2-201ENST00000555786 315 ntBASIC1.09□□□□□ -2.23
NCK1P16333 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
NCK1P16333 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.09□□□□□ -2.23
NCK1P16333 MTND1P15-201ENST00000579262 949 ntBASIC1.09□□□□□ -2.23
NCK1P16333 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.09□□□□□ -2.23
NCK1P16333 AL390123.1-201ENST00000603216 237 ntBASIC1.09□□□□□ -2.23
NCK1P16333 AL138726.1-201ENST00000614873 333 ntBASIC1.09□□□□□ -2.23
NCK1P16333 AC006504.8-201ENST00000621046 635 ntBASIC1.09□□□□□ -2.23
NCK1P16333 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.09□□□□□ -2.23
NCK1P16333 AC006435.5-201ENST00000624486 112 ntBASIC1.09□□□□□ -2.23
NCK1P16333 AC099654.5-201ENST00000636479 350 ntBASIC1.09□□□□□ -2.23
NCK1P16333 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
NCK1P16333 Y_RNA.135-201ENST00000363439 95 ntBASIC1.08□□□□□ -2.24
NCK1P16333 Y_RNA.212-201ENST00000364177 102 ntBASIC1.08□□□□□ -2.24
NCK1P16333 Y_RNA.226-201ENST00000364337 114 ntBASIC1.08□□□□□ -2.24
NCK1P16333 SNORA25.9-201ENST00000365087 128 ntBASIC1.08□□□□□ -2.24
NCK1P16333 Y_RNA.319-201ENST00000365138 92 ntBASIC1.08□□□□□ -2.24
NCK1P16333 SNORD116-1-201ENST00000384335 95 ntBASIC1.08□□□□□ -2.24
NCK1P16333 RNA5SP109-201ENST00000391010 116 ntBASIC1.08□□□□□ -2.24
NCK1P16333 AL590002.1-201ENST00000406554 418 ntBASIC1.08□□□□□ -2.24
NCK1P16333 MIR1287-201ENST00000408492 90 ntBASIC1.08□□□□□ -2.24
NCK1P16333 RNU2-16P-201ENST00000410712 136 ntBASIC1.08□□□□□ -2.24
NCK1P16333 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.08□□□□□ -2.24
NCK1P16333 MTND3P21-201ENST00000433774 331 ntBASIC1.08□□□□□ -2.24
NCK1P16333 MTND1P29-201ENST00000448112 647 ntBASIC1.08□□□□□ -2.24
NCK1P16333 Y_RNA.665-201ENST00000516177 98 ntBASIC1.08□□□□□ -2.24
NCK1P16333 RNU6-1281P-201ENST00000516223 105 ntBASIC1.08□□□□□ -2.24
NCK1P16333 RNU7-99P-201ENST00000516271 62 ntBASIC1.08□□□□□ -2.24
NCK1P16333 TPRKBP2-201ENST00000565969 475 ntBASIC1.08□□□□□ -2.24
NCK1P16333 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.08□□□□□ -2.24
NCK1P16333 AL929325.1-201ENST00000603096 117 ntBASIC1.08□□□□□ -2.24
NCK1P16333 AC022217.4-201ENST00000604389 163 ntBASIC1.08□□□□□ -2.24
NCK1P16333 U6.73-201ENST00000619194 103 ntBASIC1.08□□□□□ -2.24
NCK1P16333 AL513423.1-201ENST00000621695 132 ntBASIC1.08□□□□□ -2.24
NCK1P16333 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
NCK1P16333 RNA5SP327-201ENST00000362494 101 ntBASIC1.07□□□□□ -2.24
NCK1P16333 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
NCK1P16333 RNU6-596P-201ENST00000365395 98 ntBASIC1.07□□□□□ -2.24
NCK1P16333 RNU6-790P-201ENST00000384479 105 ntBASIC1.07□□□□□ -2.24
NCK1P16333 RNU6-95P-201ENST00000384697 107 ntBASIC1.07□□□□□ -2.24
NCK1P16333 MIR32-201ENST00000384965 70 ntBASIC1.07□□□□□ -2.24
NCK1P16333 MRPL42P3-201ENST00000401492 326 ntBASIC1.07□□□□□ -2.24
NCK1P16333 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
NCK1P16333 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.07□□□□□ -2.24
NCK1P16333 MTND1P1-201ENST00000445453 368 ntBASIC1.07□□□□□ -2.24
NCK1P16333 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.07□□□□□ -2.24
NCK1P16333 MTND1P11-201ENST00000456661 876 ntBASIC1.07□□□□□ -2.24
NCK1P16333 HMGN2P26-201ENST00000463169 339 ntBASIC1.07□□□□□ -2.24
NCK1P16333 ACA59.1-201ENST00000515966 143 ntBASIC1.07□□□□□ -2.24
NCK1P16333 Y_RNA.673-201ENST00000516306 88 ntBASIC1.07□□□□□ -2.24
NCK1P16333 SNORA31.10-201ENST00000516482 106 ntBASIC1.07□□□□□ -2.24
NCK1P16333 RN7SKP88-201ENST00000516847 250 ntBASIC1.07□□□□□ -2.24
NCK1P16333 AC027288.2-201ENST00000553028 243 ntBASIC1.07□□□□□ -2.24
NCK1P16333 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.07□□□□□ -2.24
NCK1P16333 MIR5696-201ENST00000578474 85 ntBASIC1.07□□□□□ -2.24
NCK1P16333 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
NCK1P16333 POLR3GP2-201ENST00000588366 668 ntBASIC1.07□□□□□ -2.24
NCK1P16333 AC097065.2-201ENST00000608159 533 ntBASIC1.07□□□□□ -2.24
NCK1P16333 7SK.8-201ENST00000612110 250 ntBASIC1.07□□□□□ -2.24
NCK1P16333 7SK.11-201ENST00000615477 250 ntBASIC1.07□□□□□ -2.24
NCK1P16333 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.07□□□□□ -2.24
NCK1P16333 MIR8054-201ENST00000620877 86 ntBASIC1.07□□□□□ -2.24
NCK1P16333 7SK.13-201ENST00000622040 250 ntBASIC1.07□□□□□ -2.24
NCK1P16333 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.07□□□□□ -2.24
NCK1P16333 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
NCK1P16333 RNY3P3-201ENST00000363816 102 ntBASIC1.06□□□□□ -2.24
NCK1P16333 Y_RNA.256-201ENST00000364594 104 ntBASIC1.06□□□□□ -2.24
NCK1P16333 RNA5SP259-201ENST00000365541 109 ntBASIC1.06□□□□□ -2.24
NCK1P16333 RNU6-17P-201ENST00000384245 107 ntBASIC1.06□□□□□ -2.24
NCK1P16333 RNU6-18P-201ENST00000384527 107 ntBASIC1.06□□□□□ -2.24
NCK1P16333 MIR499A-201ENST00000384903 122 ntBASIC1.06□□□□□ -2.24
NCK1P16333 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
NCK1P16333 RNU6-159P-201ENST00000391080 106 ntBASIC1.06□□□□□ -2.24
NCK1P16333 RNU11-5P-201ENST00000391216 129 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms