Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SNORA63D-201ENST00000364359 132 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 RNU6-360P-201ENST00000390944 104 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 MIR548F5-201ENST00000408421 86 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 RPS20P15-201ENST00000412792 311 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 EBAG9P1-201ENST00000418955 543 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 AC007098.1-201ENST00000420122 367 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 RPS3AP52-201ENST00000435639 297 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 AC107399.1-201ENST00000451226 265 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.71□□□□□ -2.14
PDGFRAP16234 AC025465.3-201ENST00000510570 311 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 CBX3P8-201ENST00000532412 525 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.71□□□□□ -2.14
PDGFRAP16234 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 AC100812.1-201ENST00000607622 580 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 ZNF72P-201ENST00000425869 1908 ntBASIC1.71□□□□□ -2.14
PDGFRAP16234 U3.8-201ENST00000363675 217 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 Y_RNA.160-201ENST00000363677 92 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 Y_RNA.279-201ENST00000364763 95 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 RNU6-439P-201ENST00000384188 106 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 RNU6-793P-201ENST00000384233 104 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 MIR10B-201ENST00000385011 110 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 MIR548B-201ENST00000385247 97 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 MT-TL1-201ENST00000386347 75 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PDGFRAP16234 RNU6-876P-201ENST00000391295 104 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PDGFRAP16234 FGF7P8-201ENST00000402994 292 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 RNU6-1050P-201ENST00000410388 107 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.7□□□□□ -2.14
PDGFRAP16234 MTCO3P29-201ENST00000432119 779 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 HMGN2P34-201ENST00000437647 269 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 AC069257.2-201ENST00000441819 155 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.7□□□□□ -2.14
PDGFRAP16234 AP000870.1-201ENST00000472927 406 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 AC025647.1-201ENST00000517879 253 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.7□□□□□ -2.14
PDGFRAP16234 MIR5701-3-201ENST00000578890 82 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 MIR5701-1-201ENST00000585138 82 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 AL355802.3-201ENST00000607571 545 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 MIR5701-2-201ENST00000615634 82 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 AC006001.4-201ENST00000622243 395 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.7□□□□□ -2.14
PDGFRAP16234 AC006026.1-201ENST00000444025 1803 ntBASIC1.7□□□□□ -2.14
PDGFRAP16234 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.69□□□□□ -2.14
PDGFRAP16234 Y_RNA.48-201ENST00000362710 103 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 Y_RNA.184-201ENST00000363884 108 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 SNORA72.2-201ENST00000365028 127 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 Y_RNA.390-201ENST00000383932 102 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 RNU6-767P-201ENST00000384132 107 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 Y_RNA.482-201ENST00000384377 111 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 MIR515-2-201ENST00000384883 83 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 MIR515-1-201ENST00000384884 83 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 SNORA17.3-201ENST00000391159 129 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 Y_RNA.594-201ENST00000410373 140 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 AC008134.1-201ENST00000420943 193 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.69□□□□□ -2.14
PDGFRAP16234 MTND3P23-201ENST00000431980 347 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 AL445305.1-201ENST00000432577 575 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 HSPE1P9-201ENST00000440046 311 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 AC091179.3-201ENST00000474761 144 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.69□□□□□ -2.14
PDGFRAP16234 HMGN1P13-201ENST00000505795 138 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 AC093303.1-201ENST00000514549 295 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 RNA5SP481-201ENST00000516814 122 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 Y_RNA.706-201ENST00000516933 99 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 RNA5SP437-201ENST00000517249 129 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 AL121579.1-201ENST00000555129 305 ntBASIC1.69□□□□□ -2.14
PDGFRAP16234 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.69□□□□□ -2.14
PDGFRAP16234 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
PDGFRAP16234 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
PDGFRAP16234 MIR424-201ENST00000362227 98 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 Y_RNA.179-201ENST00000363844 90 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 SNORD87-201ENST00000364849 89 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 Y_RNA.287-201ENST00000364853 94 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 RNU6-1240P-201ENST00000365155 104 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 RNU1-139P-201ENST00000391307 165 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 MIR1253-201ENST00000408273 105 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 MIR1185-2-201ENST00000408687 86 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 RNU2-7P-201ENST00000410794 178 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 RPL37P10-201ENST00000412884 288 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 AC016909.1-201ENST00000415916 166 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 PDCL2P1-201ENST00000419302 352 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.68□□□□□ -2.14
PDGFRAP16234 RPL26P26-201ENST00000480251 434 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 RPL36AP21-201ENST00000490372 323 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 Y_RNA.670-201ENST00000516255 105 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 RNU7-30P-201ENST00000516835 62 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 Y_RNA.708-201ENST00000516950 96 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.68□□□□□ -2.14
PDGFRAP16234 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.68□□□□□ -2.14
PDGFRAP16234 AK6P2-201ENST00000549020 471 ntBASIC1.68□□□□□ -2.14
PDGFRAP16234 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
PDGFRAP16234 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PDGFRAP16234 Y_RNA.2-201ENST00000362330 96 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 RNU6-845P-201ENST00000362578 103 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 Y_RNA.140-201ENST00000363474 103 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 RNU6-414P-201ENST00000363705 104 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 RNU6-457P-201ENST00000363999 107 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms