Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RNU6-793P-201ENST00000384233 104 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-997P-201ENST00000384725 107 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-159P-201ENST00000391080 106 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 MIR548F1-201ENST00000408667 84 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 AL139396.1-201ENST00000421137 167 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 MTND1P17-201ENST00000448961 204 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 RN7SKP210-201ENST00000459176 261 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 RNU7-34P-201ENST00000459394 64 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 AC091179.3-201ENST00000474761 144 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 AC103851.1-201ENST00000506833 274 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-718P-201ENST00000516166 105 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 AC024995.1-201ENST00000523014 93 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 AC134698.4-201ENST00000523451 826 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 AL590705.4-201ENST00000532209 134 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 MIR4709-201ENST00000577272 72 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 MIR6128-201ENST00000615528 109 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 ZNF299P-201ENST00000406845 1804 ntBASIC1.12□□□□□ -2.23
IGHV3-43DP0DP04 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 RNU5F-3P-201ENST00000363767 117 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 SNORD1A-201ENST00000364968 72 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.405-201ENST00000383979 100 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.451-201ENST00000384200 100 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.524-201ENST00000384564 100 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.561-201ENST00000384694 100 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 SNORA67.5-201ENST00000391036 107 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 SNORA17.3-201ENST00000391159 129 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 AL161935.2-201ENST00000414627 60 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 USP9YP30-201ENST00000430729 455 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 AC245517.4-201ENST00000448601 281 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 AP000870.1-201ENST00000472927 406 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 HMGN1P12-201ENST00000499125 195 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 AC079140.2-201ENST00000506193 142 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 RNU4-49P-201ENST00000516080 140 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 RNU1-142P-201ENST00000516682 145 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 AC019176.1-201ENST00000518519 225 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 MIR4790-201ENST00000577799 79 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 ZNF72P-201ENST00000425869 1908 ntBASIC1.11□□□□□ -2.23
IGHV3-43DP0DP04 ZNF209P-201ENST00000593450 2304 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-1266P-201ENST00000362794 105 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.179-201ENST00000363844 90 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-595P-201ENST00000363944 107 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 RNA5SP109-201ENST00000391010 116 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 MRPL35P1-201ENST00000404272 572 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 SNORA11.2-201ENST00000408318 127 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 MIR1185-2-201ENST00000408687 86 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 USMG5P1-201ENST00000425964 177 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 MTND1P34-201ENST00000438556 671 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 NDUFB4P10-201ENST00000452541 359 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 AL163195.1-201ENST00000496941 348 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 AC108210.2-201ENST00000503681 201 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.655-201ENST00000515919 96 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 RNU6-902P-201ENST00000517212 91 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 AP003033.1-201ENST00000527244 415 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 AK6P2-201ENST00000549020 471 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 AL161670.1-201ENST00000554348 137 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 AC015688.6-201ENST00000577737 104 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 MIR5695-201ENST00000579717 85 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 MIR3937-201ENST00000580135 106 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 AL359075.3-201ENST00000613288 217 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 MIR7974-201ENST00000615835 79 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 MIR7843-201ENST00000622274 79 ntBASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
IGHV3-43DP0DP04 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.6-201ENST00000362350 114 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.48-201ENST00000362710 103 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 SNORD33-201ENST00000362761 85 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.301-201ENST00000364990 103 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.490-201ENST00000384413 102 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 MIR10B-201ENST00000385011 110 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 AL356776.1-201ENST00000406574 447 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 MIR1277-201ENST00000408536 78 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 RPS26P45-201ENST00000471748 340 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.682-201ENST00000516457 100 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 Y_RNA.706-201ENST00000516933 99 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 AL121890.5-201ENST00000620848 304 ntBASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.09□□□□□ -2.23
IGHV3-43DP0DP04 MTND5P35-201ENST00000557537 1720 ntBASIC1.09□□□□□ -2.24
IGHV3-43DP0DP04 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
IGHV3-43DP0DP04 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.08□□□□□ -2.24
IGHV3-43DP0DP04 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
IGHV3-43DP0DP04 RNU6-842P-201ENST00000384269 107 ntBASIC1.08□□□□□ -2.24
IGHV3-43DP0DP04 MIR194-1-201ENST00000384892 85 ntBASIC1.08□□□□□ -2.24
IGHV3-43DP0DP04 RPL21P1-201ENST00000399532 476 ntBASIC1.08□□□□□ -2.24
IGHV3-43DP0DP04 RNU4-62P-201ENST00000410125 130 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms