Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-793P-201ENST00000384233 104 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 RNU6-1289P-201ENST00000384431 106 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 SNORA12-201ENST00000391162 147 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 SNORA3.2-201ENST00000408221 125 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 RNA5SP201-201ENST00000410316 124 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 CYCSP48-201ENST00000417124 323 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 IFNA11P-201ENST00000446352 526 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 AC007395.1-201ENST00000451333 677 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 AL138752.1-201ENST00000452964 351 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DOAP06340 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DOAP06340 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
HLA-DOAP06340 MIR3923-201ENST00000579521 83 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DOAP06340 AC005828.6-201ENST00000606610 232 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 AC103810.6-201ENST00000606708 136 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.88□□□□□ -1.95
HLA-DOAP06340 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DOAP06340 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DOAP06340 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DOAP06340 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
HLA-DOAP06340 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DOAP06340 AC099654.7-201ENST00000635788 2127 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 U8.2-201ENST00000363156 134 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 RNU4-80P-201ENST00000363200 141 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 Y_RNA.180-201ENST00000363867 113 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 Y_RNA.230-201ENST00000364348 109 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 RNU6-923P-201ENST00000364753 107 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 SNORD87-201ENST00000364849 89 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 Y_RNA.498-201ENST00000384460 102 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 RNU2-61P-201ENST00000411069 191 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 AL135786.1-201ENST00000415892 214 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 AC027124.2-201ENST00000428249 105 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DOAP06340 RNU6-255P-201ENST00000516957 105 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 AC087441.2-201ENST00000529141 262 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 MIR3136-201ENST00000583498 78 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 AC005520.5-201ENST00000613926 164 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 AL590240.4-201ENST00000616908 390 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 MIR1291-201ENST00000627649 87 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.87□□□□□ -1.95
HLA-DOAP06340 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HLA-DOAP06340 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DOAP06340 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DOAP06340 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DOAP06340 AC091564.4-201ENST00000533934 2194 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 RNU6-682P-201ENST00000363843 106 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 SNORA72.2-201ENST00000365028 127 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 DYNLT3P1-201ENST00000378574 347 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 SNORA18.2-201ENST00000383865 132 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 RNU1-57P-201ENST00000384491 166 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 Y_RNA.590-201ENST00000410140 107 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 AC097463.2-201ENST00000421074 142 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DOAP06340 AL121594.1-201ENST00000475906 575 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 AC145146.1-201ENST00000496370 254 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DOAP06340 Y_RNA.679-201ENST00000516416 91 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 SNORA27.4-201ENST00000516650 95 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 RNU6-861P-201ENST00000516745 106 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 AP002392.1-201ENST00000537692 208 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 AC079598.5-201ENST00000547460 117 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DOAP06340 MIR4765-201ENST00000585007 77 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 AC008739.2-201ENST00000597006 317 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 AC010620.2-201ENST00000600135 313 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 DEFB117-201ENST00000602356 141 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 uc_338.14-201ENST00000613162 166 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 SNORA50A-202ENST00000629536 136 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DOAP06340 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-DOAP06340 AC091152.2-201ENST00000591628 2569 ntBASIC2.86□□□□□ -1.95
HLA-DOAP06340 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HLA-DOAP06340 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DOAP06340 AC016717.2-201ENST00000609089 5141 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 Y_RNA.136-201ENST00000363444 102 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 MIR548M-201ENST00000408260 86 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 MIR1261-201ENST00000408659 82 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 RNA5SP425-201ENST00000410336 112 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 RNA5SP504-201ENST00000410676 117 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 RNU6-1328P-201ENST00000410938 106 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 RN7SKP192-201ENST00000411291 327 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 RPL23AP36-201ENST00000413895 458 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 Z98742.3-201ENST00000418637 326 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 AC004386.2-201ENST00000441858 148 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DOAP06340 snoU13.14-201ENST00000459372 104 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 RPL31P41-201ENST00000477967 372 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DOAP06340 AC026436.1-201ENST00000510537 270 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 RNU1-41P-201ENST00000516161 162 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 RNU1-48P-201ENST00000516400 162 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 MIR4282-201ENST00000583613 67 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 AC037487.3-201ENST00000606668 112 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.85□□□□□ -1.95
HLA-DOAP06340 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DOAP06340 RNU6-655P-201ENST00000362858 107 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 RNU6-454P-201ENST00000364292 107 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 SNORD114-30-201ENST00000364448 72 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms