Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
APPP05067 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.19□□□□□ -1.9
APPP05067 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
APPP05067 RNU1-62P-201ENST00000362599 164 ntBASIC3.18□□□□□ -1.9
APPP05067 RNU6-743P-201ENST00000364151 106 ntBASIC3.18□□□□□ -1.9
APPP05067 Y_RNA.331-201ENST00000365267 102 ntBASIC3.18□□□□□ -1.9
APPP05067 Y_RNA.418-201ENST00000384029 102 ntBASIC3.18□□□□□ -1.9
APPP05067 AL139109.1-201ENST00000455491 297 ntBASIC3.18□□□□□ -1.9
APPP05067 UBE2DNL-203ENST00000474922 222 ntBASIC3.18□□□□□ -1.9
APPP05067 AC023141.11-201ENST00000508864 202 ntBASIC3.18□□□□□ -1.9
APPP05067 RPL23AP94-201ENST00000512518 302 ntBASIC3.18□□□□□ -1.9
APPP05067 AC096725.1-201ENST00000514266 313 ntBASIC3.18□□□□□ -1.9
APPP05067 RPL21P9-201ENST00000556149 474 ntBASIC3.18□□□□□ -1.9
APPP05067 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.18□□□□□ -1.9
APPP05067 AC008749.1-201ENST00000597650 306 ntBASIC3.18□□□□□ -1.9
APPP05067 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
APPP05067 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.18□□□□□ -1.9
APPP05067 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
APPP05067 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
APPP05067 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.17□□□□□ -1.9
APPP05067 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
APPP05067 RNU6-461P-201ENST00000364195 107 ntBASIC3.17□□□□□ -1.9
APPP05067 RNU6-290P-201ENST00000365212 101 ntBASIC3.17□□□□□ -1.9
APPP05067 MIR548B-201ENST00000385247 97 ntBASIC3.17□□□□□ -1.9
APPP05067 AL590004.2-201ENST00000404787 371 ntBASIC3.17□□□□□ -1.9
APPP05067 AL109933.2-201ENST00000452651 260 ntBASIC3.17□□□□□ -1.9
APPP05067 AL356575.1-201ENST00000603008 283 ntBASIC3.17□□□□□ -1.9
APPP05067 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
APPP05067 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APPP05067 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
APPP05067 SNORA67.1-201ENST00000364749 141 ntBASIC3.16□□□□□ -1.9
APPP05067 RNU6-338P-201ENST00000383888 105 ntBASIC3.16□□□□□ -1.9
APPP05067 Y_RNA.462-201ENST00000384268 102 ntBASIC3.16□□□□□ -1.9
APPP05067 RNU6-21P-201ENST00000384710 107 ntBASIC3.16□□□□□ -1.9
APPP05067 RNU2-14P-201ENST00000411053 191 ntBASIC3.16□□□□□ -1.9
APPP05067 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.16□□□□□ -1.9
APPP05067 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
APPP05067 RNU6-586P-201ENST00000517265 104 ntBASIC3.16□□□□□ -1.9
APPP05067 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.16□□□□□ -1.9
APPP05067 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.16□□□□□ -1.9
APPP05067 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.16□□□□□ -1.9
APPP05067 AC027176.1-201ENST00000560204 514 ntBASIC3.16□□□□□ -1.9
APPP05067 SNORD11B-201ENST00000607707 90 ntBASIC3.16□□□□□ -1.9
APPP05067 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
APPP05067 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.15□□□□□ -1.9
APPP05067 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
APPP05067 RNU4-90P-201ENST00000362773 141 ntBASIC3.15□□□□□ -1.91
APPP05067 RNU6-1305P-201ENST00000364353 104 ntBASIC3.15□□□□□ -1.91
APPP05067 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
APPP05067 MICF-203ENST00000432679 129 ntBASIC3.15□□□□□ -1.91
APPP05067 RNU7-14P-201ENST00000459331 62 ntBASIC3.15□□□□□ -1.91
APPP05067 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.15□□□□□ -1.91
APPP05067 RNU6-1023P-201ENST00000516137 106 ntBASIC3.15□□□□□ -1.91
APPP05067 RNU5F-4P-201ENST00000516581 114 ntBASIC3.15□□□□□ -1.91
APPP05067 AC026470.2-201ENST00000561492 181 ntBASIC3.15□□□□□ -1.91
APPP05067 AC006023.1-201ENST00000603944 259 ntBASIC3.15□□□□□ -1.91
APPP05067 AC022441.3-201ENST00000605737 136 ntBASIC3.15□□□□□ -1.91
APPP05067 SNORD113-5-201ENST00000607261 78 ntBASIC3.15□□□□□ -1.91
APPP05067 AC006001.4-201ENST00000622243 395 ntBASIC3.15□□□□□ -1.91
APPP05067 AC127459.3-201ENST00000624328 466 ntBASIC3.15□□□□□ -1.91
APPP05067 AC068205.3-201ENST00000636385 468 ntBASIC3.15□□□□□ -1.91
APPP05067 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
APPP05067 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
APPP05067 RNU6-1266P-201ENST00000362794 105 ntBASIC3.14□□□□□ -1.91
APPP05067 Y_RNA.65-201ENST00000362846 100 ntBASIC3.14□□□□□ -1.91
APPP05067 Y_RNA.117-201ENST00000363294 101 ntBASIC3.14□□□□□ -1.91
APPP05067 SNORA20.1-201ENST00000364790 130 ntBASIC3.14□□□□□ -1.91
APPP05067 SNORA72.2-201ENST00000365028 127 ntBASIC3.14□□□□□ -1.91
APPP05067 U6atac.2-201ENST00000408644 118 ntBASIC3.14□□□□□ -1.91
APPP05067 RNU5A-5P-201ENST00000411054 116 ntBASIC3.14□□□□□ -1.91
APPP05067 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.14□□□□□ -1.91
APPP05067 AC139712.2-201ENST00000424302 339 ntBASIC3.14□□□□□ -1.91
APPP05067 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.14□□□□□ -1.91
APPP05067 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.14□□□□□ -1.91
APPP05067 AC016717.1-201ENST00000448918 286 ntBASIC3.14□□□□□ -1.91
APPP05067 SEPT14P8-201ENST00000508026 178 ntBASIC3.14□□□□□ -1.91
APPP05067 SERF1AP1-201ENST00000514575 187 ntBASIC3.14□□□□□ -1.91
APPP05067 RNU6-155P-201ENST00000516347 100 ntBASIC3.14□□□□□ -1.91
APPP05067 RNU6-344P-201ENST00000516635 111 ntBASIC3.14□□□□□ -1.91
APPP05067 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.14□□□□□ -1.91
APPP05067 PRELID2P1-201ENST00000552837 301 ntBASIC3.14□□□□□ -1.91
APPP05067 DEFB117-201ENST00000602356 141 ntBASIC3.14□□□□□ -1.91
APPP05067 AC069294.1-201ENST00000608397 350 ntBASIC3.14□□□□□ -1.91
APPP05067 MIR3674-201ENST00000636576 68 ntBASIC3.14□□□□□ -1.91
APPP05067 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.14□□□□□ -1.91
APPP05067 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
APPP05067 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
APPP05067 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.13□□□□□ -1.91
APPP05067 RNA5SP125-201ENST00000364843 120 ntBASIC3.13□□□□□ -1.91
APPP05067 Y_RNA.383-201ENST00000383855 97 ntBASIC3.13□□□□□ -1.91
APPP05067 Y_RNA.416-201ENST00000384014 113 ntBASIC3.13□□□□□ -1.91
APPP05067 SNORD14D-201ENST00000384390 87 ntBASIC3.13□□□□□ -1.91
APPP05067 Y_RNA.569-201ENST00000384749 103 ntBASIC3.13□□□□□ -1.91
APPP05067 MIR29B2-201ENST00000385055 81 ntBASIC3.13□□□□□ -1.91
APPP05067 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.13□□□□□ -1.91
APPP05067 HMGN2P9-201ENST00000476875 229 ntBASIC3.13□□□□□ -1.91
APPP05067 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.13□□□□□ -1.91
APPP05067 AC074133.1-201ENST00000515696 183 ntBASIC3.13□□□□□ -1.91
APPP05067 RNA5SP82-201ENST00000516707 92 ntBASIC3.13□□□□□ -1.91
APPP05067 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms