Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.3□□□□□ -2.2
P04436 AC095038.3-201ENST00000634439 195 ntBASIC1.3□□□□□ -2.2
P04436 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.3□□□□□ -2.2
P04436 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
P04436 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
P04436 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
P04436 Y_RNA.86-201ENST00000363020 111 ntBASIC1.29□□□□□ -2.2
P04436 RNU6-873P-201ENST00000363833 107 ntBASIC1.29□□□□□ -2.2
P04436 RNU1-96P-201ENST00000364163 162 ntBASIC1.29□□□□□ -2.2
P04436 Y_RNA.287-201ENST00000364853 94 ntBASIC1.29□□□□□ -2.2
P04436 Y_RNA.319-201ENST00000365138 92 ntBASIC1.29□□□□□ -2.2
P04436 HMGN2P34-201ENST00000437647 269 ntBASIC1.29□□□□□ -2.2
P04436 MTND1P34-201ENST00000438556 671 ntBASIC1.29□□□□□ -2.2
P04436 AC092473.1-201ENST00000441098 221 ntBASIC1.29□□□□□ -2.2
P04436 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.29□□□□□ -2.2
P04436 HSPE1P24-201ENST00000450782 238 ntBASIC1.29□□□□□ -2.2
P04436 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.29□□□□□ -2.2
P04436 RNU7-57P-201ENST00000459540 60 ntBASIC1.29□□□□□ -2.2
P04436 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.29□□□□□ -2.2
P04436 MTND5P5-201ENST00000503764 376 ntBASIC1.29□□□□□ -2.2
P04436 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.29□□□□□ -2.2
P04436 RNU6-1053P-201ENST00000515930 101 ntBASIC1.29□□□□□ -2.2
P04436 ACA59.1-201ENST00000515966 143 ntBASIC1.29□□□□□ -2.2
P04436 RNU6-948P-201ENST00000516374 107 ntBASIC1.29□□□□□ -2.2
P04436 RNA5SP481-201ENST00000516814 122 ntBASIC1.29□□□□□ -2.2
P04436 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.29□□□□□ -2.2
P04436 MIR4742-201ENST00000581069 85 ntBASIC1.29□□□□□ -2.2
P04436 AC018638.8-201ENST00000588755 281 ntBASIC1.29□□□□□ -2.2
P04436 AL359697.1-201ENST00000624879 587 ntBASIC1.29□□□□□ -2.2
P04436 MTND4P12-201ENST00000498999 1377 ntBASIC1.29□□□□□ -2.2
P04436 AL391987.6-201ENST00000305671 199 ntBASIC1.28□□□□□ -2.2
P04436 SNORD87-201ENST00000364849 89 ntBASIC1.28□□□□□ -2.2
P04436 RNU6-245P-201ENST00000384020 107 ntBASIC1.28□□□□□ -2.2
P04436 Y_RNA.473-201ENST00000384333 102 ntBASIC1.28□□□□□ -2.2
P04436 RNU6-159P-201ENST00000391080 106 ntBASIC1.28□□□□□ -2.2
P04436 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.28□□□□□ -2.2
P04436 MTCO3P29-201ENST00000432119 779 ntBASIC1.28□□□□□ -2.2
P04436 SNORD5.1-201ENST00000458800 75 ntBASIC1.28□□□□□ -2.2
P04436 RNU1-98P-201ENST00000458992 160 ntBASIC1.28□□□□□ -2.2
P04436 RPS26P55-201ENST00000471178 356 ntBASIC1.28□□□□□ -2.2
P04436 RNA5SP54-201ENST00000516951 92 ntBASIC1.28□□□□□ -2.2
P04436 RNU1-117P-201ENST00000517041 158 ntBASIC1.28□□□□□ -2.2
P04436 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.28□□□□□ -2.2
P04436 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.28□□□□□ -2.2
P04436 AC068790.6-201ENST00000602558 258 ntBASIC1.28□□□□□ -2.2
P04436 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.28□□□□□ -2.2
P04436 AC084782.3-201ENST00000612282 578 ntBASIC1.28□□□□□ -2.2
P04436 AL157834.3-201ENST00000615543 103 ntBASIC1.28□□□□□ -2.2
P04436 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
P04436 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
P04436 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
P04436 Y_RNA.48-201ENST00000362710 103 ntBASIC1.27□□□□□ -2.21
P04436 snoU2-30.2-201ENST00000362805 70 ntBASIC1.27□□□□□ -2.21
P04436 RNU6-595P-201ENST00000363944 107 ntBASIC1.27□□□□□ -2.21
P04436 SNORD1A-201ENST00000364968 72 ntBASIC1.27□□□□□ -2.21
P04436 MIR153-2-201ENST00000385225 87 ntBASIC1.27□□□□□ -2.21
P04436 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
P04436 AL356776.1-201ENST00000406574 447 ntBASIC1.27□□□□□ -2.21
P04436 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
P04436 RNU2-7P-201ENST00000410794 178 ntBASIC1.27□□□□□ -2.21
P04436 RNU6-57P-201ENST00000411348 103 ntBASIC1.27□□□□□ -2.21
P04436 AC004965.1-201ENST00000413033 213 ntBASIC1.27□□□□□ -2.21
P04436 AL161935.2-201ENST00000414627 60 ntBASIC1.27□□□□□ -2.21
P04436 AC009161.1-201ENST00000417306 376 ntBASIC1.27□□□□□ -2.21
P04436 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.27□□□□□ -2.21
P04436 CST2P1-201ENST00000425770 87 ntBASIC1.27□□□□□ -2.21
P04436 MTND4LP16-201ENST00000440828 295 ntBASIC1.27□□□□□ -2.21
P04436 AC069257.2-201ENST00000441819 155 ntBASIC1.27□□□□□ -2.21
P04436 AC099513.1-201ENST00000490423 301 ntBASIC1.27□□□□□ -2.21
P04436 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.27□□□□□ -2.21
P04436 AC006001.4-201ENST00000622243 395 ntBASIC1.27□□□□□ -2.21
P04436 U6.108-201ENST00000637764 58 ntBASIC1.27□□□□□ -2.21
P04436 ICE2P2-201ENST00000483823 2787 ntBASIC1.26□□□□□ -2.21
P04436 AC245060.5-201ENST00000610778 3293 ntBASIC1.26□□□□□ -2.21
P04436 SNORD33-201ENST00000362761 85 ntBASIC1.26□□□□□ -2.21
P04436 Y_RNA.405-201ENST00000383979 100 ntBASIC1.26□□□□□ -2.21
P04436 RNU6-203P-201ENST00000384038 104 ntBASIC1.26□□□□□ -2.21
P04436 Y_RNA.451-201ENST00000384200 100 ntBASIC1.26□□□□□ -2.21
P04436 Y_RNA.524-201ENST00000384564 100 ntBASIC1.26□□□□□ -2.21
P04436 Y_RNA.561-201ENST00000384694 100 ntBASIC1.26□□□□□ -2.21
P04436 MIR10B-201ENST00000385011 110 ntBASIC1.26□□□□□ -2.21
P04436 MIR548K-201ENST00000408406 116 ntBASIC1.26□□□□□ -2.21
P04436 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.26□□□□□ -2.21
P04436 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.26□□□□□ -2.21
P04436 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.26□□□□□ -2.21
P04436 RNU6-221P-201ENST00000459541 99 ntBASIC1.26□□□□□ -2.21
P04436 AP000870.1-201ENST00000472927 406 ntBASIC1.26□□□□□ -2.21
P04436 AC091179.3-201ENST00000474761 144 ntBASIC1.26□□□□□ -2.21
P04436 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.26□□□□□ -2.21
P04436 AC026782.1-201ENST00000512952 449 ntBASIC1.26□□□□□ -2.21
P04436 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.26□□□□□ -2.21
P04436 Y_RNA.682-201ENST00000516457 100 ntBASIC1.26□□□□□ -2.21
P04436 SNORA25.14-201ENST00000516481 132 ntBASIC1.26□□□□□ -2.21
P04436 AC025647.1-201ENST00000517879 253 ntBASIC1.26□□□□□ -2.21
P04436 AF235103.2-201ENST00000525753 346 ntBASIC1.26□□□□□ -2.21
P04436 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.26□□□□□ -2.21
P04436 CBX3P8-201ENST00000532412 525 ntBASIC1.26□□□□□ -2.21
P04436 MIR6128-201ENST00000615528 109 ntBASIC1.26□□□□□ -2.21
P04436 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.26□□□□□ -2.21
P04436 AL078596.1-201ENST00000624856 447 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms