Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFAP04085 SNORA68.1-201ENST00000364537 132 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 RNU6-768P-201ENST00000384683 107 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 MIR218-2-201ENST00000385006 110 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 RNA5SP511-201ENST00000410487 115 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 Y_RNA.622-201ENST00000411091 108 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 Y_RNA.629-201ENST00000411368 105 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 AC016909.1-201ENST00000415916 166 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 AL161788.1-201ENST00000441805 169 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 AC107934.2-201ENST00000518653 310 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 AC022695.1-201ENST00000522089 237 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 AC015720.1-201ENST00000565251 277 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 AC090115.4-201ENST00000609970 188 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 MIR7702-201ENST00000621931 59 ntBASIC3.54□□□□□ -1.84
PDGFAP04085 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFAP04085 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PDGFAP04085 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.54□□□□□ -1.84
PDGFAP04085 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.53□□□□□ -1.84
PDGFAP04085 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFAP04085 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFAP04085 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFAP04085 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
PDGFAP04085 SNORD45.3-201ENST00000363836 72 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 RNU6-117P-201ENST00000365415 107 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 SNORA72-201ENST00000384339 132 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 MIR1278-201ENST00000408753 81 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 AL357134.1-201ENST00000445848 426 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.53□□□□□ -1.84
PDGFAP04085 PHBP14-201ENST00000512887 367 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.53□□□□□ -1.84
PDGFAP04085 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.53□□□□□ -1.84
PDGFAP04085 MIR5187-201ENST00000583479 76 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 MIR5195-201ENST00000583555 115 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 RNVU1-4-201ENST00000612985 164 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 MIR8058-201ENST00000615737 89 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PDGFAP04085 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDGFAP04085 MFSD8-236ENST00000641509 4050 ntBASIC3.53□□□□□ -1.84
PDGFAP04085 ZNF702P-202ENST00000434269 1966 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDGFAP04085 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
PDGFAP04085 MIR184-201ENST00000384962 84 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 Y_RNA.587-201ENST00000391210 103 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 SNORA75.5-201ENST00000391291 81 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 CYCSP35-201ENST00000451978 304 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 RNU7-197P-201ENST00000458836 62 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 RNU6-1211P-201ENST00000459179 105 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 RPS29P12-201ENST00000460178 152 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 RPL31P61-201ENST00000496160 376 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.52□□□□□ -1.85
PDGFAP04085 SNORA4.4-201ENST00000515921 135 ntBASIC3.52□□□□□ -1.85
PDGFAP04085 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.52□□□□□ -1.85
PDGFAP04085 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PDGFAP04085 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFAP04085 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFAP04085 Y_RNA.127-201ENST00000363386 109 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 RNU6-743P-201ENST00000364151 106 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 RNA5SP205-201ENST00000364653 136 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 Y_RNA.542-201ENST00000384641 111 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 MIR490-201ENST00000384865 128 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 MIR95-201ENST00000385072 81 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 RNU2-55P-201ENST00000411146 174 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.51□□□□□ -1.85
PDGFAP04085 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.51□□□□□ -1.85
PDGFAP04085 AC023141.11-201ENST00000508864 202 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 RN7SKP18-201ENST00000516005 275 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.51□□□□□ -1.85
PDGFAP04085 MIR4438-201ENST00000585271 93 ntBASIC3.51□□□□□ -1.85
PDGFAP04085 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDGFAP04085 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.5□□□□□ -1.85
PDGFAP04085 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.5□□□□□ -1.85
PDGFAP04085 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PDGFAP04085 RNU1-22P-201ENST00000363334 158 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 SNORD116-14-201ENST00000383894 92 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 SNORD116-17-201ENST00000383929 92 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 RNU6-1080P-201ENST00000383982 107 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 SNORD116-15-201ENST00000384445 92 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 SNORD116-19-201ENST00000384729 92 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 RNU2-63P-201ENST00000410792 194 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 Z92545.1-201ENST00000411782 234 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.5□□□□□ -1.85
PDGFAP04085 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.5□□□□□ -1.85
PDGFAP04085 SNRPGP8-201ENST00000454064 226 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 BX510359.1-201ENST00000456973 237 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 AC092991.1-201ENST00000477176 376 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 RPS29P21-201ENST00000496272 170 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 AC097462.1-201ENST00000514125 324 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 SNORA48.11-201ENST00000517015 89 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 MIR2681-201ENST00000581814 105 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFAP04085 AL031274.2-201ENST00000599419 203 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 AL356280.1-201ENST00000603614 379 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 AL021707.8-201ENST00000609428 183 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 RMST_8.1-201ENST00000610287 165 ntBASIC3.5□□□□□ -1.85
PDGFAP04085 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.5□□□□□ -1.85
PDGFAP04085 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDGFAP04085 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFAP04085 Y_RNA.71-201ENST00000362892 104 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 Y_RNA.218-201ENST00000364218 104 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms