Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNORD111.1-201ENST00000516421 86 ntBASIC0.24□□□□□ -2.37
APOEP02649 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
APOEP02649 SNRPGP20-201ENST00000604477 205 ntBASIC0.24□□□□□ -2.37
APOEP02649 SNORA28-201ENST00000606769 126 ntBASIC0.24□□□□□ -2.37
APOEP02649 RMST_3.1-201ENST00000611651 109 ntBASIC0.24□□□□□ -2.37
APOEP02649 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
APOEP02649 MTND4P9-201ENST00000507819 1346 ntBASIC0.23□□□□□ -2.37
APOEP02649 Y_RNA.36-201ENST00000362602 112 ntBASIC0.23□□□□□ -2.37
APOEP02649 RNU6-227P-201ENST00000362865 103 ntBASIC0.23□□□□□ -2.37
APOEP02649 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.23□□□□□ -2.37
APOEP02649 RNA5SP504-201ENST00000410676 117 ntBASIC0.23□□□□□ -2.37
APOEP02649 AC098592.1-201ENST00000419352 333 ntBASIC0.23□□□□□ -2.37
APOEP02649 MTCO2P34-201ENST00000421994 607 ntBASIC0.23□□□□□ -2.37
APOEP02649 MTND3P9-201ENST00000429526 346 ntBASIC0.23□□□□□ -2.37
APOEP02649 MTCO2P7-201ENST00000446518 666 ntBASIC0.23□□□□□ -2.37
APOEP02649 ZNF114P1-201ENST00000453500 292 ntBASIC0.23□□□□□ -2.37
APOEP02649 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.23□□□□□ -2.37
APOEP02649 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.23□□□□□ -2.37
APOEP02649 AC022868.1-201ENST00000517767 391 ntBASIC0.23□□□□□ -2.37
APOEP02649 MRPS36P4-201ENST00000534436 298 ntBASIC0.23□□□□□ -2.37
APOEP02649 FRG2DP-202ENST00000566967 323 ntBASIC0.23□□□□□ -2.37
APOEP02649 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.23□□□□□ -2.37
APOEP02649 AC025449.1-201ENST00000603896 529 ntBASIC0.23□□□□□ -2.37
APOEP02649 AP000240.1-201ENST00000609910 452 ntBASIC0.23□□□□□ -2.37
APOEP02649 SCARNA4-201ENST00000629045 128 ntBASIC0.23□□□□□ -2.37
APOEP02649 RNA5SP264-201ENST00000363115 107 ntBASIC0.22□□□□□ -2.37
APOEP02649 MIR193B-201ENST00000384907 83 ntBASIC0.22□□□□□ -2.37
APOEP02649 MIR487A-201ENST00000385009 80 ntBASIC0.22□□□□□ -2.37
APOEP02649 Y_RNA.598-201ENST00000410480 95 ntBASIC0.22□□□□□ -2.37
APOEP02649 RNU2-70P-201ENST00000410718 179 ntBASIC0.22□□□□□ -2.37
APOEP02649 AL663109.1-201ENST00000411498 844 ntBASIC0.22□□□□□ -2.37
APOEP02649 UBE2D3P4-201ENST00000441973 436 ntBASIC0.22□□□□□ -2.37
APOEP02649 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.22□□□□□ -2.37
APOEP02649 RNU7-94P-201ENST00000459576 63 ntBASIC0.22□□□□□ -2.37
APOEP02649 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.22□□□□□ -2.37
APOEP02649 RNU7-12P-201ENST00000516030 62 ntBASIC0.22□□□□□ -2.37
APOEP02649 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.22□□□□□ -2.37
APOEP02649 MTND2P32-201ENST00000521584 1038 ntBASIC0.22□□□□□ -2.37
APOEP02649 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.22□□□□□ -2.37
APOEP02649 AL117336.2-201ENST00000602435 335 ntBASIC0.22□□□□□ -2.37
APOEP02649 Z84480.1-201ENST00000605131 311 ntBASIC0.22□□□□□ -2.37
APOEP02649 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
APOEP02649 SNORD113-6-201ENST00000363345 75 ntBASIC0.21□□□□□ -2.38
APOEP02649 Y_RNA.265-201ENST00000364677 108 ntBASIC0.21□□□□□ -2.38
APOEP02649 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
APOEP02649 RNU6-1286P-201ENST00000383871 107 ntBASIC0.21□□□□□ -2.38
APOEP02649 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
APOEP02649 RNU6-1110P-201ENST00000516462 101 ntBASIC0.21□□□□□ -2.38
APOEP02649 MTND4LP26-201ENST00000518144 282 ntBASIC0.21□□□□□ -2.38
APOEP02649 AC106038.2-201ENST00000520706 568 ntBASIC0.21□□□□□ -2.38
APOEP02649 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.21□□□□□ -2.38
APOEP02649 MTND1P15-201ENST00000579262 949 ntBASIC0.21□□□□□ -2.38
APOEP02649 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
APOEP02649 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.21□□□□□ -2.38
APOEP02649 ZNF204P-201ENST00000416749 2397 ntBASIC0.2□□□□□ -2.38
APOEP02649 Y_RNA.399-201ENST00000383955 105 ntBASIC0.2□□□□□ -2.38
APOEP02649 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.2□□□□□ -2.38
APOEP02649 AC105417.1-201ENST00000514691 285 ntBASIC0.2□□□□□ -2.38
APOEP02649 RNU6-344P-201ENST00000516635 111 ntBASIC0.2□□□□□ -2.38
APOEP02649 AP003072.2-201ENST00000527756 676 ntBASIC0.2□□□□□ -2.38
APOEP02649 AC092354.1-201ENST00000606057 376 ntBASIC0.2□□□□□ -2.38
APOEP02649 RNU6-94P-201ENST00000607728 107 ntBASIC0.2□□□□□ -2.38
APOEP02649 AC017083.3-201ENST00000609955 700 ntBASIC0.2□□□□□ -2.38
APOEP02649 AC122133.1-201ENST00000613964 233 ntBASIC0.2□□□□□ -2.38
APOEP02649 MIR924-201ENST00000638017 53 ntBASIC0.2□□□□□ -2.38
APOEP02649 RNU6-108P-201ENST00000365558 107 ntBASIC0.19□□□□□ -2.38
APOEP02649 RNU6-163P-201ENST00000384396 106 ntBASIC0.19□□□□□ -2.38
APOEP02649 Y_RNA.540-201ENST00000384638 111 ntBASIC0.19□□□□□ -2.38
APOEP02649 RNU6-1067P-201ENST00000384752 107 ntBASIC0.19□□□□□ -2.38
APOEP02649 SSR1P2-201ENST00000415208 787 ntBASIC0.19□□□□□ -2.38
APOEP02649 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.19□□□□□ -2.38
APOEP02649 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.19□□□□□ -2.38
APOEP02649 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.19□□□□□ -2.38
APOEP02649 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.19□□□□□ -2.38
APOEP02649 RNU7-167P-201ENST00000459160 62 ntBASIC0.19□□□□□ -2.38
APOEP02649 AF186996.7-201ENST00000492781 209 ntBASIC0.19□□□□□ -2.38
APOEP02649 AC004223.2-201ENST00000590309 544 ntBASIC0.19□□□□□ -2.38
APOEP02649 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.19□□□□□ -2.38
APOEP02649 AC007014.2-201ENST00000615581 479 ntBASIC0.19□□□□□ -2.38
APOEP02649 MIR7844-201ENST00000616161 122 ntBASIC0.19□□□□□ -2.38
APOEP02649 SEPT14P17-201ENST00000617978 177 ntBASIC0.19□□□□□ -2.38
APOEP02649 uc_338.11-201ENST00000619132 160 ntBASIC0.19□□□□□ -2.38
APOEP02649 AC005592.1-201ENST00000566527 1640 ntBASIC0.19□□□□□ -2.38
APOEP02649 MTND4P4-201ENST00000439033 1366 ntBASIC0.19□□□□□ -2.38
APOEP02649 Y_RNA.123-201ENST00000363338 102 ntBASIC0.18□□□□□ -2.38
APOEP02649 MIR526A1-201ENST00000384897 85 ntBASIC0.18□□□□□ -2.38
APOEP02649 MIR513B-201ENST00000385136 84 ntBASIC0.18□□□□□ -2.38
APOEP02649 RNU6-1106P-201ENST00000390845 107 ntBASIC0.18□□□□□ -2.38
APOEP02649 MTCYBP10-201ENST00000424905 650 ntBASIC0.18□□□□□ -2.38
APOEP02649 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.18□□□□□ -2.38
APOEP02649 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.18□□□□□ -2.38
APOEP02649 AC004854.1-201ENST00000440356 349 ntBASIC0.18□□□□□ -2.38
APOEP02649 RNA5SP480-201ENST00000516840 109 ntBASIC0.18□□□□□ -2.38
APOEP02649 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
APOEP02649 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
APOEP02649 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.18□□□□□ -2.38
APOEP02649 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.18□□□□□ -2.38
APOEP02649 MIR103A2-201ENST00000362154 78 ntBASIC0.17□□□□□ -2.38
APOEP02649 RNU6-1097P-201ENST00000363586 107 ntBASIC0.17□□□□□ -2.38
APOEP02649 RNU6-137P-201ENST00000363680 108 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms