Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
DDX58O95786 Y_RNA.106-201ENST00000363189 100 ntBASIC2.11□□□□□ -2.07
DDX58O95786 RNU6-137P-201ENST00000363680 108 ntBASIC2.11□□□□□ -2.07
DDX58O95786 Y_RNA.303-201ENST00000364998 94 ntBASIC2.11□□□□□ -2.07
DDX58O95786 RNU6-159P-201ENST00000391080 106 ntBASIC2.11□□□□□ -2.07
DDX58O95786 USP9YP16-201ENST00000430287 407 ntBASIC2.11□□□□□ -2.07
DDX58O95786 MTND3P23-201ENST00000431980 347 ntBASIC2.11□□□□□ -2.07
DDX58O95786 AC093019.1-201ENST00000443135 252 ntBASIC2.11□□□□□ -2.07
DDX58O95786 AC016717.1-201ENST00000448918 286 ntBASIC2.11□□□□□ -2.07
DDX58O95786 USP9YP23-201ENST00000455085 407 ntBASIC2.11□□□□□ -2.07
DDX58O95786 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.11□□□□□ -2.07
DDX58O95786 AC024614.2-201ENST00000577584 372 ntBASIC2.11□□□□□ -2.07
DDX58O95786 MIR4713-201ENST00000582691 75 ntBASIC2.11□□□□□ -2.07
DDX58O95786 AC113139.1-201ENST00000605049 239 ntBASIC2.11□□□□□ -2.07
DDX58O95786 AC098657.3-201ENST00000620434 263 ntBASIC2.11□□□□□ -2.07
DDX58O95786 AC092794.2-201ENST00000620933 563 ntBASIC2.11□□□□□ -2.07
DDX58O95786 AL078596.1-201ENST00000624856 447 ntBASIC2.11□□□□□ -2.07
DDX58O95786 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
DDX58O95786 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.11□□□□□ -2.07
DDX58O95786 MIR340-201ENST00000362125 95 ntBASIC2.1□□□□□ -2.07
DDX58O95786 RNU5F-3P-201ENST00000363767 117 ntBASIC2.1□□□□□ -2.07
DDX58O95786 MIR190B-201ENST00000401119 79 ntBASIC2.1□□□□□ -2.07
DDX58O95786 AC092423.1-201ENST00000430165 186 ntBASIC2.1□□□□□ -2.07
DDX58O95786 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.1□□□□□ -2.07
DDX58O95786 RPL30P15-201ENST00000457129 321 ntBASIC2.1□□□□□ -2.07
DDX58O95786 AC091951.2-201ENST00000500762 203 ntBASIC2.1□□□□□ -2.07
DDX58O95786 AC067942.3-201ENST00000512025 362 ntBASIC2.1□□□□□ -2.07
DDX58O95786 RNU6-1041P-201ENST00000516254 102 ntBASIC2.1□□□□□ -2.07
DDX58O95786 RNU2-34P-201ENST00000516534 121 ntBASIC2.1□□□□□ -2.07
DDX58O95786 RNU6-344P-201ENST00000516635 111 ntBASIC2.1□□□□□ -2.07
DDX58O95786 GNAI2P1-201ENST00000541815 315 ntBASIC2.1□□□□□ -2.07
DDX58O95786 SNORD11B-201ENST00000607707 90 ntBASIC2.1□□□□□ -2.07
DDX58O95786 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
DDX58O95786 MTND5P16-201ENST00000460269 1703 ntBASIC2.09□□□□□ -2.07
DDX58O95786 RNU6-222P-201ENST00000362438 107 ntBASIC2.09□□□□□ -2.07
DDX58O95786 RNU6-457P-201ENST00000363999 107 ntBASIC2.09□□□□□ -2.07
DDX58O95786 Y_RNA.384-201ENST00000383909 102 ntBASIC2.09□□□□□ -2.07
DDX58O95786 AC007098.1-201ENST00000420122 367 ntBASIC2.09□□□□□ -2.07
DDX58O95786 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.09□□□□□ -2.07
DDX58O95786 MTCYBP10-201ENST00000424905 650 ntBASIC2.09□□□□□ -2.07
DDX58O95786 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.09□□□□□ -2.07
DDX58O95786 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
DDX58O95786 Y_RNA.676-201ENST00000516393 96 ntBASIC2.09□□□□□ -2.07
DDX58O95786 RNU6-264P-201ENST00000517134 104 ntBASIC2.09□□□□□ -2.07
DDX58O95786 CBX3P4-201ENST00000538909 354 ntBASIC2.09□□□□□ -2.07
DDX58O95786 AP001094.1-201ENST00000579805 193 ntBASIC2.09□□□□□ -2.07
DDX58O95786 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.09□□□□□ -2.07
DDX58O95786 AC006026.1-201ENST00000444025 1803 ntBASIC2.08□□□□□ -2.08
DDX58O95786 RNU1-62P-201ENST00000362599 164 ntBASIC2.08□□□□□ -2.08
DDX58O95786 Y_RNA.179-201ENST00000363844 90 ntBASIC2.08□□□□□ -2.08
DDX58O95786 SNORD48-201ENST00000364953 64 ntBASIC2.08□□□□□ -2.08
DDX58O95786 RNU2-7P-201ENST00000410794 178 ntBASIC2.08□□□□□ -2.08
DDX58O95786 MTND5P20-201ENST00000448677 143 ntBASIC2.08□□□□□ -2.08
DDX58O95786 RNU7-57P-201ENST00000459540 60 ntBASIC2.08□□□□□ -2.08
DDX58O95786 HMGN2P9-201ENST00000476875 229 ntBASIC2.08□□□□□ -2.08
DDX58O95786 APOOP3-201ENST00000536787 586 ntBASIC2.08□□□□□ -2.08
DDX58O95786 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.08□□□□□ -2.08
DDX58O95786 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX58O95786 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
DDX58O95786 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
DDX58O95786 RNU6-862P-201ENST00000362804 105 ntBASIC2.07□□□□□ -2.08
DDX58O95786 SNORD87-201ENST00000364849 89 ntBASIC2.07□□□□□ -2.08
DDX58O95786 Y_RNA.338-201ENST00000365320 114 ntBASIC2.07□□□□□ -2.08
DDX58O95786 Y_RNA.356-201ENST00000365475 113 ntBASIC2.07□□□□□ -2.08
DDX58O95786 RNU6-793P-201ENST00000384233 104 ntBASIC2.07□□□□□ -2.08
DDX58O95786 RNU6-975P-201ENST00000384296 105 ntBASIC2.07□□□□□ -2.08
DDX58O95786 RNU6-310P-201ENST00000384655 107 ntBASIC2.07□□□□□ -2.08
DDX58O95786 MIR10B-201ENST00000385011 110 ntBASIC2.07□□□□□ -2.08
DDX58O95786 MIR586-201ENST00000385035 97 ntBASIC2.07□□□□□ -2.08
DDX58O95786 RNU6-1009P-201ENST00000390996 107 ntBASIC2.07□□□□□ -2.08
DDX58O95786 MIR1253-201ENST00000408273 105 ntBASIC2.07□□□□□ -2.08
DDX58O95786 Y_RNA.646-201ENST00000410980 101 ntBASIC2.07□□□□□ -2.08
DDX58O95786 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX58O95786 RPL17P19-201ENST00000489069 552 ntBASIC2.07□□□□□ -2.08
DDX58O95786 FRG2DP-202ENST00000566967 323 ntBASIC2.07□□□□□ -2.08
DDX58O95786 MIR5701-3-201ENST00000578890 82 ntBASIC2.07□□□□□ -2.08
DDX58O95786 MIR5701-1-201ENST00000585138 82 ntBASIC2.07□□□□□ -2.08
DDX58O95786 AC069114.2-201ENST00000604699 304 ntBASIC2.07□□□□□ -2.08
DDX58O95786 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.07□□□□□ -2.08
DDX58O95786 MIR5701-2-201ENST00000615634 82 ntBASIC2.07□□□□□ -2.08
DDX58O95786 MIR1302-1-201ENST00000637932 143 ntBASIC2.07□□□□□ -2.08
DDX58O95786 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
DDX58O95786 RNU6-1188P-201ENST00000363795 107 ntBASIC2.06□□□□□ -2.08
DDX58O95786 RNU6-99P-201ENST00000364721 107 ntBASIC2.06□□□□□ -2.08
DDX58O95786 Y_RNA.387-201ENST00000383918 102 ntBASIC2.06□□□□□ -2.08
DDX58O95786 Y_RNA.474-201ENST00000384341 102 ntBASIC2.06□□□□□ -2.08
DDX58O95786 RNU6-1297P-201ENST00000384415 104 ntBASIC2.06□□□□□ -2.08
DDX58O95786 RNU6-1235P-201ENST00000384559 107 ntBASIC2.06□□□□□ -2.08
DDX58O95786 RNA5SP100-201ENST00000410903 110 ntBASIC2.06□□□□□ -2.08
DDX58O95786 RNA5SP59-201ENST00000410922 110 ntBASIC2.06□□□□□ -2.08
DDX58O95786 RNU6-57P-201ENST00000411348 103 ntBASIC2.06□□□□□ -2.08
DDX58O95786 AC009310.1-201ENST00000414414 451 ntBASIC2.06□□□□□ -2.08
DDX58O95786 EBAG9P1-201ENST00000418955 543 ntBASIC2.06□□□□□ -2.08
DDX58O95786 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX58O95786 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX58O95786 Y_RNA.653-201ENST00000459091 95 ntBASIC2.06□□□□□ -2.08
DDX58O95786 RNU6-498P-201ENST00000459468 107 ntBASIC2.06□□□□□ -2.08
DDX58O95786 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX58O95786 RNU6-1114P-201ENST00000516022 107 ntBASIC2.06□□□□□ -2.08
DDX58O95786 RNU6-507P-201ENST00000516045 100 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms