Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 RNU6-344P-201ENST00000516635 111 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 RNA5SP54-201ENST00000516951 92 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK3AO75631 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.16□□□□□ -2.22
UPK3AO75631 AC008269.2-201ENST00000561915 1105 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 AL359821.1-201ENST00000605519 182 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 MIR8065-201ENST00000620577 100 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
UPK3AO75631 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
UPK3AO75631 Y_RNA.414-201ENST00000384011 101 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 RNU6-950P-201ENST00000384651 107 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 MIR194-1-201ENST00000384892 85 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK3AO75631 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK3AO75631 RPL37P10-201ENST00000412884 288 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC016909.1-201ENST00000415916 166 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC016907.1-201ENST00000419483 435 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 ZNF885P-201ENST00000420174 1098 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.15□□□□□ -2.23
UPK3AO75631 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK3AO75631 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.15□□□□□ -2.23
UPK3AO75631 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK3AO75631 AC015922.2-201ENST00000435593 184 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 MTCO2P7-201ENST00000446518 666 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK3AO75631 RNU7-34P-201ENST00000459394 64 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 TRMT112P2-201ENST00000512910 132 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 MTND1P5-201ENST00000517906 940 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK3AO75631 AC109635.3-201ENST00000529536 185 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK3AO75631 MIR3672-201ENST00000584290 82 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 MIR4781-201ENST00000585250 76 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 SNORD11B-201ENST00000607707 90 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC019193.3-201ENST00000609144 554 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC040896.1-201ENST00000613819 479 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK3AO75631 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 snoZ196.1-201ENST00000625269 89 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 AC024614.3-201ENST00000637860 256 ntBASIC1.15□□□□□ -2.23
UPK3AO75631 Y_RNA.100-201ENST00000363141 102 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 Y_RNA.212-201ENST00000364177 102 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 Y_RNA.287-201ENST00000364853 94 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 Y_RNA.319-201ENST00000365138 92 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 Y_RNA.436-201ENST00000384097 102 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 MIR513A1-201ENST00000385138 129 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 RNA5SP467-201ENST00000391274 118 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 RNA5SP504-201ENST00000410676 117 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 RNU6-321P-201ENST00000410912 106 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 MTATP6P26-201ENST00000445926 662 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.14□□□□□ -2.23
UPK3AO75631 HMGN1P12-201ENST00000499125 195 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 SNORA25.14-201ENST00000516481 132 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 RNU6-273P-201ENST00000516937 96 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 RNU6-58P-201ENST00000517143 103 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 AC024995.1-201ENST00000523014 93 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.14□□□□□ -2.23
UPK3AO75631 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.14□□□□□ -2.23
UPK3AO75631 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.14□□□□□ -2.23
UPK3AO75631 AC124303.1-201ENST00000605703 360 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 AC012557.2-201ENST00000605919 418 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 AC015540.1-201ENST00000615828 501 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
UPK3AO75631 AC099654.5-201ENST00000636479 350 ntBASIC1.14□□□□□ -2.23
UPK3AO75631 AL391987.6-201ENST00000305671 199 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 Y_RNA.135-201ENST00000363439 95 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 RNU6-727P-201ENST00000363592 107 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 SNORD115-32-201ENST00000364079 82 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 SNORD87-201ENST00000364849 89 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 RNU6-534P-201ENST00000364877 106 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 RNU6-245P-201ENST00000384020 107 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 RNU6-306P-201ENST00000384617 107 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 RNU6-541P-201ENST00000384709 110 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 MIR153-2-201ENST00000385225 87 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 RNA5SP109-201ENST00000391010 116 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 RPL30P16-201ENST00000419341 429 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3AO75631 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3AO75631 RPL31P58-201ENST00000469001 379 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3AO75631 AC103851.1-201ENST00000506833 274 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 RNA5SP454-201ENST00000517231 127 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 AC025647.1-201ENST00000517879 253 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 CYP3A52P-201ENST00000563326 91 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK3AO75631 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
UPK3AO75631 RNU6-1123P-201ENST00000362347 106 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 RNU6-873P-201ENST00000363833 107 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 SNORD115-8-201ENST00000363856 82 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 SNORD115-38-201ENST00000365037 82 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 RNU6-1240P-201ENST00000365155 104 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 Y_RNA.402-201ENST00000383972 102 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 AC008134.1-201ENST00000420943 193 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 MTND3P21-201ENST00000433774 331 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 RNU6-1198P-201ENST00000516904 67 ntBASIC1.12□□□□□ -2.23
UPK3AO75631 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms