Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC019176.1-201ENST00000518519 225 ntBASIC1.23□□□□□ -2.21
CXCL13O43927 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.23□□□□□ -2.21
CXCL13O43927 AC024995.1-201ENST00000523014 93 ntBASIC1.23□□□□□ -2.21
CXCL13O43927 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.23□□□□□ -2.21
CXCL13O43927 MIR4709-201ENST00000577272 72 ntBASIC1.23□□□□□ -2.21
CXCL13O43927 7SK.7-201ENST00000603504 247 ntBASIC1.23□□□□□ -2.21
CXCL13O43927 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.23□□□□□ -2.21
CXCL13O43927 AC100810.6-201ENST00000638068 285 ntBASIC1.23□□□□□ -2.21
CXCL13O43927 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.23□□□□□ -2.21
CXCL13O43927 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CXCL13O43927 MTND4P12-201ENST00000498999 1377 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CXCL13O43927 Y_RNA.3-201ENST00000362331 103 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 RNU1-62P-201ENST00000362599 164 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 SNORD87-201ENST00000364849 89 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 RNU6-534P-201ENST00000364877 106 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 Y_RNA.318-201ENST00000365131 97 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 RNU6-1240P-201ENST00000365155 104 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CXCL13O43927 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.22□□□□□ -2.21
CXCL13O43927 AC027119.1-201ENST00000440877 241 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 RNU7-34P-201ENST00000459394 64 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 HMGN1P12-201ENST00000499125 195 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 RNU6-864P-201ENST00000516256 108 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 RNA5SP454-201ENST00000517231 127 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.22□□□□□ -2.21
CXCL13O43927 SUB1P3-201ENST00000564581 315 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.22□□□□□ -2.21
CXCL13O43927 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.22□□□□□ -2.21
CXCL13O43927 MIR5696-201ENST00000578474 85 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 MIR3937-201ENST00000580135 106 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 AP003465.2-201ENST00000602571 373 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 AC009248.2-201ENST00000619826 254 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 AL121890.5-201ENST00000620848 304 ntBASIC1.22□□□□□ -2.21
CXCL13O43927 RNU6-727P-201ENST00000363592 107 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 RNU6-137P-201ENST00000363680 108 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 Y_RNA.295-201ENST00000364918 102 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 Y_RNA.338-201ENST00000365320 114 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 RNU6-17P-201ENST00000384245 107 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 RNU6-18P-201ENST00000384527 107 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 Y_RNA.573-201ENST00000384763 105 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 MIR194-1-201ENST00000384892 85 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 MRPL35P1-201ENST00000404272 572 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 AC243428.1-201ENST00000421099 264 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 RPS27P16-201ENST00000425758 201 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.21□□□□□ -2.22
CXCL13O43927 AL163195.1-201ENST00000496941 348 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 AC103851.1-201ENST00000506833 274 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 UBL5P4-201ENST00000562584 236 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 AC015688.6-201ENST00000577737 104 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.21□□□□□ -2.22
CXCL13O43927 MIR4273-201ENST00000582824 84 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 snoU13.31-201ENST00000607291 104 ntBASIC1.21□□□□□ -2.22
CXCL13O43927 MTND5P35-201ENST00000557537 1720 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.2□□□□□ -2.22
CXCL13O43927 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 Y_RNA.157-201ENST00000363638 102 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 RNU5F-3P-201ENST00000363767 117 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 RNU6-280P-201ENST00000364145 104 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 Y_RNA.415-201ENST00000384012 112 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 Y_RNA.533-201ENST00000384596 114 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 RNA5SP109-201ENST00000391010 116 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 RNU6-159P-201ENST00000391080 106 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 RNA5SP118-201ENST00000410385 109 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 RPS26P45-201ENST00000471748 340 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 AC091179.3-201ENST00000474761 144 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 RNU7-175P-201ENST00000515915 61 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 RNU1-142P-201ENST00000516682 145 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 AC093783.1-201ENST00000612976 329 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 AL157834.3-201ENST00000615543 103 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 U4.5-201ENST00000617137 123 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 MIR3662-201ENST00000637030 95 ntBASIC1.2□□□□□ -2.22
CXCL13O43927 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CXCL13O43927 U3.8-201ENST00000363675 217 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 RNU6-1013P-201ENST00000384180 107 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 RNU6-793P-201ENST00000384233 104 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 RNU6-831P-201ENST00000384548 107 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 MIR1185-2-201ENST00000408687 86 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 RNU6-955P-201ENST00000410497 104 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 RNU6-1148P-201ENST00000410992 104 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 AC004965.1-201ENST00000413033 213 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 RPL23AP36-201ENST00000413895 458 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 AL135790.2-201ENST00000437701 267 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 MTND4LP16-201ENST00000440828 295 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 NDUFB4P10-201ENST00000452541 359 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 AL163540.1-201ENST00000485382 386 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 AC108729.3-201ENST00000513484 108 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 RNU6-1088P-201ENST00000516850 104 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 RNU1-54P-201ENST00000517181 120 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 AC134698.4-201ENST00000523451 826 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 AP003033.1-201ENST00000527244 415 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 AK6P2-201ENST00000549020 471 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 MIR4742-201ENST00000581069 85 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 AL359075.3-201ENST00000613288 217 ntBASIC1.19□□□□□ -2.22
CXCL13O43927 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms