Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SRGAP3O43295 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
SRGAP3O43295 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.33□□□□□ -1.88
SRGAP3O43295 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SRGAP3O43295 RNU6-529P-201ENST00000363383 104 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 SNORD87-201ENST00000364849 89 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 Y_RNA.343-201ENST00000365354 112 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 RNU6-81P-201ENST00000365608 104 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 RNU6-449P-201ENST00000383914 107 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 MIR887-201ENST00000401258 79 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 U3.40-201ENST00000408706 208 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.33□□□□□ -1.88
SRGAP3O43295 SEPT7P4-201ENST00000437076 306 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.33□□□□□ -1.88
SRGAP3O43295 SNRPGP3-201ENST00000469405 227 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.33□□□□□ -1.88
SRGAP3O43295 SNORD19.2-201ENST00000516978 73 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 RNU2-12P-201ENST00000517216 168 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 SUMO2P18-201ENST00000518873 252 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.33□□□□□ -1.88
SRGAP3O43295 AC091895.1-201ENST00000624494 256 ntBASIC3.33□□□□□ -1.88
SRGAP3O43295 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SRGAP3O43295 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.33□□□□□ -1.88
SRGAP3O43295 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.33□□□□□ -1.88
SRGAP3O43295 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.32□□□□□ -1.88
SRGAP3O43295 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SRGAP3O43295 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.32□□□□□ -1.88
SRGAP3O43295 Y_RNA.357-201ENST00000365487 109 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 Y_RNA.510-201ENST00000384511 114 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 RNU6-1117P-201ENST00000384525 104 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 MIR634-201ENST00000385208 97 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 RNU6-763P-201ENST00000390865 106 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 AL031121.1-201ENST00000406553 254 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.32□□□□□ -1.88
SRGAP3O43295 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.32□□□□□ -1.88
SRGAP3O43295 AC063976.3-201ENST00000426849 329 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 AC004386.2-201ENST00000441858 148 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 RPS20P10-201ENST00000451209 253 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.32□□□□□ -1.88
SRGAP3O43295 RN7SL499P-201ENST00000481141 276 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 RNU6-436P-201ENST00000516171 114 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.32□□□□□ -1.88
SRGAP3O43295 SNORD11B-201ENST00000607707 90 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 PCGEM1.1-201ENST00000613431 131 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 AC005562.2-201ENST00000618264 111 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 MIR6733-201ENST00000635723 61 ntBASIC3.32□□□□□ -1.88
SRGAP3O43295 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SRGAP3O43295 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
SRGAP3O43295 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.32□□□□□ -1.88
SRGAP3O43295 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SRGAP3O43295 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.32□□□□□ -1.88
SRGAP3O43295 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.31□□□□□ -1.88
SRGAP3O43295 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.31□□□□□ -1.88
SRGAP3O43295 RNU6-859P-201ENST00000362728 107 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 SNORD114-19-201ENST00000363072 75 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 RNU6-454P-201ENST00000364292 107 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 RNU6-198P-201ENST00000384258 104 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 Y_RNA.497-201ENST00000384447 98 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 Y_RNA.580-201ENST00000391004 95 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 HSPE1P26-201ENST00000405341 275 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 RNA5SP201-201ENST00000410316 124 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.31□□□□□ -1.88
SRGAP3O43295 AL109933.2-201ENST00000452651 260 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 AC010099.1-201ENST00000455434 375 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 U8.19-201ENST00000459095 133 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 Y_RNA.637-201ENST00000459424 114 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 RPS27AP9-201ENST00000477681 438 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.31□□□□□ -1.88
SRGAP3O43295 MIR5006-201ENST00000583027 110 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 MIR4635-201ENST00000583759 79 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.31□□□□□ -1.88
SRGAP3O43295 AF127577.6-201ENST00000623352 2191 ntBASIC3.31□□□□□ -1.88
SRGAP3O43295 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.3□□□□□ -1.88
SRGAP3O43295 SNORA18.2-201ENST00000383865 132 ntBASIC3.3□□□□□ -1.88
SRGAP3O43295 Y_RNA.488-201ENST00000384403 102 ntBASIC3.3□□□□□ -1.88
SRGAP3O43295 RNA5SP184-201ENST00000411071 108 ntBASIC3.3□□□□□ -1.88
SRGAP3O43295 AC004866.1-201ENST00000411748 78 ntBASIC3.3□□□□□ -1.88
SRGAP3O43295 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.3□□□□□ -1.88
SRGAP3O43295 AC145146.1-201ENST00000496370 254 ntBASIC3.3□□□□□ -1.88
SRGAP3O43295 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.3□□□□□ -1.88
SRGAP3O43295 AC100767.1-201ENST00000528178 123 ntBASIC3.3□□□□□ -1.88
SRGAP3O43295 EIF4A1P12-201ENST00000551910 141 ntBASIC3.3□□□□□ -1.88
SRGAP3O43295 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.3□□□□□ -1.88
SRGAP3O43295 TCL6_2.1-201ENST00000615162 119 ntBASIC3.3□□□□□ -1.88
SRGAP3O43295 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRGAP3O43295 AC010889.1-201ENST00000566193 2666 ntBASIC3.3□□□□□ -1.88
SRGAP3O43295 Y_RNA.23-201ENST00000362496 106 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 RNU4-15P-201ENST00000362613 141 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 RNU6-1010P-201ENST00000362757 107 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 U3.9-201ENST00000363823 204 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 RNU6-312P-201ENST00000364629 107 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 U8.9-201ENST00000365667 134 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 Y_RNA.400-201ENST00000383963 111 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 RNU6-417P-201ENST00000384712 107 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 RNU6-131P-201ENST00000391144 107 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.29□□□□□ -1.88
SRGAP3O43295 AL714022.1-201ENST00000439897 151 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.29□□□□□ -1.88
SRGAP3O43295 RPL23AP70-201ENST00000483361 460 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 Y_RNA.797-201ENST00000515977 94 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms