Protein–RNA interactions for Protein: O43186

CRX, Cone-rod homeobox protein, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRXO43186 MIR1185-2-201ENST00000408687 86 ntBASIC0.48□□□□□ -2.33
CRXO43186 RNU6-248P-201ENST00000410720 107 ntBASIC0.48□□□□□ -2.33
CRXO43186 AL358934.1-201ENST00000432346 324 ntBASIC0.48□□□□□ -2.33
CRXO43186 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.48□□□□□ -2.33
CRXO43186 MTND4P32-201ENST00000437189 1237 ntBASIC0.48□□□□□ -2.33
CRXO43186 AL049830.1-201ENST00000468034 425 ntBASIC0.48□□□□□ -2.33
CRXO43186 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
CRXO43186 AC027419.1-201ENST00000522976 328 ntBASIC0.48□□□□□ -2.33
CRXO43186 CYP3A137P-201ENST00000562436 69 ntBASIC0.48□□□□□ -2.33
CRXO43186 SNORD11B-201ENST00000607707 90 ntBASIC0.48□□□□□ -2.33
CRXO43186 AC022960.3-201ENST00000619794 441 ntBASIC0.48□□□□□ -2.33
CRXO43186 AC079248.2-201ENST00000623779 326 ntBASIC0.48□□□□□ -2.33
CRXO43186 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
CRXO43186 RNU6-1266P-201ENST00000362794 105 ntBASIC0.47□□□□□ -2.33
CRXO43186 RNU6-1329P-201ENST00000365664 107 ntBASIC0.47□□□□□ -2.33
CRXO43186 RNY3P10-201ENST00000384764 102 ntBASIC0.47□□□□□ -2.33
CRXO43186 MIR508-201ENST00000384857 115 ntBASIC0.47□□□□□ -2.33
CRXO43186 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.47□□□□□ -2.33
CRXO43186 MTATP6P18-201ENST00000417994 673 ntBASIC0.47□□□□□ -2.33
CRXO43186 FABP5P4-201ENST00000437203 171 ntBASIC0.47□□□□□ -2.33
CRXO43186 AC104332.1-201ENST00000440471 797 ntBASIC0.47□□□□□ -2.33
CRXO43186 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.47□□□□□ -2.33
CRXO43186 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.47□□□□□ -2.33
CRXO43186 RPL23AP75-201ENST00000491601 451 ntBASIC0.47□□□□□ -2.33
CRXO43186 AC022493.2-201ENST00000506122 481 ntBASIC0.47□□□□□ -2.33
CRXO43186 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.47□□□□□ -2.33
CRXO43186 AC087854.1-201ENST00000519706 414 ntBASIC0.47□□□□□ -2.33
CRXO43186 MIR3913-1-201ENST00000577744 102 ntBASIC0.47□□□□□ -2.33
CRXO43186 AC245884.10-201ENST00000597355 337 ntBASIC0.47□□□□□ -2.33
CRXO43186 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
CRXO43186 AC068787.1-201ENST00000623908 691 ntBASIC0.47□□□□□ -2.33
CRXO43186 RNU4-21P-201ENST00000362802 126 ntBASIC0.46□□□□□ -2.34
CRXO43186 Y_RNA.164-201ENST00000363709 102 ntBASIC0.46□□□□□ -2.34
CRXO43186 RNU6-996P-201ENST00000365438 107 ntBASIC0.46□□□□□ -2.34
CRXO43186 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
CRXO43186 AL606923.1-201ENST00000406616 190 ntBASIC0.46□□□□□ -2.34
CRXO43186 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.46□□□□□ -2.34
CRXO43186 MTCO2P11-201ENST00000431069 680 ntBASIC0.46□□□□□ -2.34
CRXO43186 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.46□□□□□ -2.34
CRXO43186 SNRPGP9-201ENST00000456025 225 ntBASIC0.46□□□□□ -2.34
CRXO43186 LINC01399-202ENST00000458450 244 ntBASIC0.46□□□□□ -2.34
CRXO43186 RNU7-63P-201ENST00000459054 62 ntBASIC0.46□□□□□ -2.34
CRXO43186 RPS29P1-201ENST00000465274 159 ntBASIC0.46□□□□□ -2.34
CRXO43186 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.46□□□□□ -2.34
CRXO43186 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.46□□□□□ -2.34
CRXO43186 RNU7-12P-201ENST00000516030 62 ntBASIC0.46□□□□□ -2.34
CRXO43186 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
CRXO43186 MTND1P5-201ENST00000517906 940 ntBASIC0.46□□□□□ -2.34
CRXO43186 AC060788.1-201ENST00000521318 469 ntBASIC0.46□□□□□ -2.34
CRXO43186 AC004812.1-201ENST00000540773 146 ntBASIC0.46□□□□□ -2.34
CRXO43186 SCOCP1-201ENST00000554676 349 ntBASIC0.46□□□□□ -2.34
CRXO43186 MIR3915-201ENST00000578518 97 ntBASIC0.46□□□□□ -2.34
CRXO43186 AL590095.2-201ENST00000604136 117 ntBASIC0.46□□□□□ -2.34
CRXO43186 AL357078.3-201ENST00000607528 618 ntBASIC0.46□□□□□ -2.34
CRXO43186 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.46□□□□□ -2.34
CRXO43186 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CRXO43186 Y_RNA.191-201ENST00000363972 113 ntBASIC0.45□□□□□ -2.34
CRXO43186 RNU6-424P-201ENST00000384367 105 ntBASIC0.45□□□□□ -2.34
CRXO43186 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
CRXO43186 AL049545.1-201ENST00000401856 572 ntBASIC0.45□□□□□ -2.34
CRXO43186 MTND2P18-201ENST00000419962 1030 ntBASIC0.45□□□□□ -2.34
CRXO43186 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.45□□□□□ -2.34
CRXO43186 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
CRXO43186 AC091133.4-201ENST00000511142 308 ntBASIC0.45□□□□□ -2.34
CRXO43186 RNU6-1038P-201ENST00000516516 104 ntBASIC0.45□□□□□ -2.34
CRXO43186 RNU6-58P-201ENST00000517143 103 ntBASIC0.45□□□□□ -2.34
CRXO43186 MIR4438-201ENST00000585271 93 ntBASIC0.45□□□□□ -2.34
CRXO43186 AC234772.3-201ENST00000602277 528 ntBASIC0.45□□□□□ -2.34
CRXO43186 AL096861.1-201ENST00000610899 123 ntBASIC0.45□□□□□ -2.34
CRXO43186 AL354950.2-201ENST00000617939 290 ntBASIC0.45□□□□□ -2.34
CRXO43186 RNU6-727P-201ENST00000363592 107 ntBASIC0.44□□□□□ -2.34
CRXO43186 SNORA25.9-201ENST00000365087 128 ntBASIC0.44□□□□□ -2.34
CRXO43186 Y_RNA.330-201ENST00000365230 109 ntBASIC0.44□□□□□ -2.34
CRXO43186 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.44□□□□□ -2.34
CRXO43186 MT-TH-201ENST00000387441 69 ntBASIC0.44□□□□□ -2.34
CRXO43186 RNU6-325P-201ENST00000411132 105 ntBASIC0.44□□□□□ -2.34
CRXO43186 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.44□□□□□ -2.34
CRXO43186 AC073415.1-201ENST00000449240 153 ntBASIC0.44□□□□□ -2.34
CRXO43186 TPTE2P5-203ENST00000458118 728 ntBASIC0.44□□□□□ -2.34
CRXO43186 AC113410.1-201ENST00000505029 247 ntBASIC0.44□□□□□ -2.34
CRXO43186 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.44□□□□□ -2.34
CRXO43186 RNU6-189P-201ENST00000516120 101 ntBASIC0.44□□□□□ -2.34
CRXO43186 SNORA25.14-201ENST00000516481 132 ntBASIC0.44□□□□□ -2.34
CRXO43186 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CRXO43186 AC023157.2-201ENST00000540596 141 ntBASIC0.44□□□□□ -2.34
CRXO43186 AC009094.1-201ENST00000564443 426 ntBASIC0.44□□□□□ -2.34
CRXO43186 AC133485.1-201ENST00000567176 124 ntBASIC0.44□□□□□ -2.34
CRXO43186 AC138907.6-201ENST00000568401 126 ntBASIC0.44□□□□□ -2.34
CRXO43186 MIR4452-201ENST00000583004 71 ntBASIC0.44□□□□□ -2.34
CRXO43186 AC004223.2-201ENST00000590309 544 ntBASIC0.44□□□□□ -2.34
CRXO43186 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
CRXO43186 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.44□□□□□ -2.34
CRXO43186 AC072046.2-201ENST00000618366 268 ntBASIC0.44□□□□□ -2.34
CRXO43186 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
CRXO43186 FGF7P2-201ENST00000332473 296 ntBASIC0.43□□□□□ -2.34
CRXO43186 Y_RNA.100-201ENST00000363141 102 ntBASIC0.43□□□□□ -2.34
CRXO43186 U3.8-201ENST00000363675 217 ntBASIC0.43□□□□□ -2.34
CRXO43186 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
CRXO43186 RNU6-17P-201ENST00000384245 107 ntBASIC0.43□□□□□ -2.34
CRXO43186 RNU6-18P-201ENST00000384527 107 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms