Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 Y_RNA.272-201ENST00000364696 102 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 RNU6-898P-201ENST00000365627 104 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 SNORD116-18-201ENST00000383961 92 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 MIR518C-201ENST00000384822 101 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 MIR518D-201ENST00000385014 87 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 AL390729.2-201ENST00000416137 156 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXN1O15353 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXN1O15353 Y_RNA.641-201ENST00000459414 105 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 SRIP1-201ENST00000489235 288 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 AC140059.1-201ENST00000489238 361 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 SNORA40.9-201ENST00000515895 93 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 RNU6-703P-201ENST00000516946 107 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 RNU6-58P-201ENST00000517143 103 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 AP004607.1-201ENST00000524456 203 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 LINC00933-203ENST00000559812 219 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 AC055872.1-201ENST00000570978 278 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 AC009163.5-201ENST00000575421 637 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 AC020895.1-201ENST00000595362 272 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 AL357075.2-201ENST00000614906 189 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 U4.3-201ENST00000621047 82 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
FOXN1O15353 MAPK10-266ENST00000641066 6555 ntBASIC3.04□□□□□ -1.92
FOXN1O15353 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
FOXN1O15353 Y_RNA.262-201ENST00000364641 102 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXN1O15353 Y_RNA.497-201ENST00000384447 98 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 MIR186-201ENST00000384988 86 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 MIR325-201ENST00000385260 98 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 Y_RNA.580-201ENST00000391004 95 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 RNU6-131P-201ENST00000391144 107 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 AC092047.1-201ENST00000424997 240 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.03□□□□□ -1.92
FOXN1O15353 RNA5SP282-201ENST00000516355 108 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 RNU6-966P-201ENST00000516479 104 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 RNU6-1282P-201ENST00000516735 96 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.03□□□□□ -1.92
FOXN1O15353 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.03□□□□□ -1.92
FOXN1O15353 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.03□□□□□ -1.92
FOXN1O15353 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXN1O15353 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 AC002076.2-201ENST00000617362 122 ntBASIC3.03□□□□□ -1.92
FOXN1O15353 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXN1O15353 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXN1O15353 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
FOXN1O15353 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
FOXN1O15353 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXN1O15353 RNU6-653P-201ENST00000363074 106 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 RNU4-56P-201ENST00000364700 142 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 RNU6-140P-201ENST00000384566 108 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 SNORA22C-201ENST00000384614 134 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 SNORA1.3-201ENST00000384676 136 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 SNORA80E-201ENST00000384744 137 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 RNU6-1154P-201ENST00000391001 104 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 RNU6-1245P-201ENST00000411130 106 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 RPL23AP95-201ENST00000426806 265 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 SNRPGP7-201ENST00000469016 106 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 HMGB3P3-201ENST00000510526 400 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 RNU6-479P-201ENST00000516348 105 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 RNU6-62P-201ENST00000516526 102 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 AP005660.1-201ENST00000522972 293 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 NDUFA5P6-201ENST00000542110 379 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 AC005176.2-201ENST00000596933 147 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 snoU18.1-201ENST00000629629 71 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 AC022336.2-201ENST00000568966 2538 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 ZNF204P-201ENST00000416749 2397 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.02□□□□□ -1.93
FOXN1O15353 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXN1O15353 MIR337-201ENST00000362281 93 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 SNORD56.1-201ENST00000362913 68 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 RNU1-17P-201ENST00000363022 152 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 RNU6-142P-201ENST00000384019 107 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 RNU6-211P-201ENST00000384047 107 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 SNORA36A-201ENST00000384221 132 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 SNORD116-20-201ENST00000384529 92 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 RNU6-658P-201ENST00000384606 106 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 AL357139.1-201ENST00000407792 426 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 AC138623.1-201ENST00000418060 216 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 RPS12P2-201ENST00000439728 269 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 AC006026.2-201ENST00000457376 180 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 RNA5SP310-201ENST00000459084 116 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXN1O15353 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXN1O15353 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXN1O15353 RNU6-313P-201ENST00000516317 112 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 AC022441.3-201ENST00000605737 136 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 AC024581.2-201ENST00000619986 252 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 AC091895.1-201ENST00000624494 256 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 MTND1P7-201ENST00000632801 297 ntBASIC3.01□□□□□ -1.93
FOXN1O15353 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXN1O15353 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXN1O15353 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXN1O15353 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3□□□□□ -1.93
FOXN1O15353 RNU6-137P-201ENST00000363680 108 ntBASIC3□□□□□ -1.93
FOXN1O15353 Y_RNA.343-201ENST00000365354 112 ntBASIC3□□□□□ -1.93
FOXN1O15353 Y_RNA.568-201ENST00000384742 113 ntBASIC3□□□□□ -1.93
FOXN1O15353 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3□□□□□ -1.93
FOXN1O15353 RNA5SP210-201ENST00000391034 120 ntBASIC3□□□□□ -1.93
FOXN1O15353 AL512844.2-201ENST00000433990 593 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms