Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MIR18A-201ENST00000362310 71 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 RNU6-227P-201ENST00000362865 103 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 SNORA25.3-201ENST00000363205 127 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 RNU6-137P-201ENST00000363680 108 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 SNORD113.3-201ENST00000364630 78 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 RNU6-636P-201ENST00000384598 107 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 MIR518A1-201ENST00000385068 85 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.1□□□□□ -2.43
HMGB3O15347 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.1□□□□□ -2.43
HMGB3O15347 AC074133.1-201ENST00000515696 183 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 RNU11-2P-201ENST00000516898 142 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.1□□□□□ -2.43
HMGB3O15347 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.1□□□□□ -2.43
HMGB3O15347 MIR3941-201ENST00000582572 103 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 AC091304.9-201ENST00000612091 226 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 AL138960.2-201ENST00000625145 535 ntBASIC-0.1□□□□□ -2.43
HMGB3O15347 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
HMGB3O15347 MIR1-1-201ENST00000362147 71 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 RNU6-833P-201ENST00000363486 107 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 SNORA42.1-201ENST00000363515 137 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 RNU4-67P-201ENST00000364569 141 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 RNA5SP482-201ENST00000391269 118 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 MIR320B2-201ENST00000408479 138 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.11□□□□□ -2.43
HMGB3O15347 RNU7-182P-201ENST00000459009 62 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 AC010469.2-201ENST00000496412 480 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.11□□□□□ -2.43
HMGB3O15347 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.11□□□□□ -2.43
HMGB3O15347 SNORA62.5-201ENST00000516634 120 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 RNU4-77P-201ENST00000516692 156 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 RNU6-612P-201ENST00000516909 102 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 AC069113.3-201ENST00000521019 150 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.11□□□□□ -2.43
HMGB3O15347 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 MIR4438-201ENST00000585271 93 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 uc_338.34-201ENST00000617467 174 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 uc_338.11-201ENST00000619132 160 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 MTND4P4-201ENST00000439033 1366 ntBASIC-0.11□□□□□ -2.43
HMGB3O15347 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
HMGB3O15347 RNU6-501P-201ENST00000364072 100 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 SNORD114-9-201ENST00000364370 72 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 RNU6-42P-201ENST00000384165 107 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 RNU6-83P-201ENST00000384568 112 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 AL365184.2-201ENST00000431139 435 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.12□□□□□ -2.43
HMGB3O15347 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.12□□□□□ -2.43
HMGB3O15347 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.12□□□□□ -2.43
HMGB3O15347 HMGN2P26-201ENST00000463169 339 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 SNORD27.1-201ENST00000516319 72 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 RNU1-117P-201ENST00000517041 158 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 AP003072.2-201ENST00000527756 676 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 MIR4300-201ENST00000581016 96 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 MIR4514-201ENST00000581410 57 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 AC018714.1-201ENST00000605028 208 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.12□□□□□ -2.43
HMGB3O15347 MIR6718-201ENST00000616153 80 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 MIR8070-201ENST00000616510 88 ntBASIC-0.12□□□□□ -2.43
HMGB3O15347 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 RNU6-74P-201ENST00000384235 107 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 MIR562-201ENST00000384894 95 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
HMGB3O15347 AC104850.1-201ENST00000435940 476 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 AC091133.4-201ENST00000511142 308 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 MTND2P31-201ENST00000512602 616 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 RNU6-863P-201ENST00000515989 104 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 RNA5SP436-201ENST00000516020 115 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 RNU2-56P-201ENST00000516826 190 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 RNU6-410P-201ENST00000517006 107 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 RNU6-58P-201ENST00000517143 103 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 MTND2P32-201ENST00000521584 1038 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.13□□□□□ -2.43
HMGB3O15347 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.13□□□□□ -2.43
HMGB3O15347 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
HMGB3O15347 AC022878.1-201ENST00000530684 149 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 RNU6-85P-201ENST00000605989 107 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 SNORD11B-201ENST00000607707 90 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 AL008636.1-201ENST00000625038 1018 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 SEPT14P19-203ENST00000633205 211 ntBASIC-0.13□□□□□ -2.43
HMGB3O15347 AC073544.1-201ENST00000600110 1595 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 SNORA25.9-201ENST00000365087 128 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 MIR891A-201ENST00000401237 79 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.14□□□□□ -2.43
HMGB3O15347 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.14□□□□□ -2.43
HMGB3O15347 AC079781.2-201ENST00000446424 169 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 MRPS10P1-201ENST00000448483 130 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 AC093534.1-201ENST00000504977 132 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 RPL39P5-202ENST00000512505 151 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 MTATP6P9-201ENST00000515039 680 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 RNU7-41P-201ENST00000515917 61 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 MTND1P5-201ENST00000517906 940 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 AC023932.2-201ENST00000603176 175 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 AC007684.1-201ENST00000609671 477 ntBASIC-0.14□□□□□ -2.43
HMGB3O15347 AL049777.1-201ENST00000622740 518 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms