Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU6-439P-201ENST00000384188 106 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NPHP1O15259 Y_RNA.594-201ENST00000410373 140 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 RNA5SP489-201ENST00000410986 109 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 RNU6-57P-201ENST00000411348 103 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 CST2P1-201ENST00000425770 87 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 MTND1P2-201ENST00000430604 821 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 DNAJC19P9-201ENST00000555084 351 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 SNORD53B-201ENST00000577887 78 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 BX248123.2-201ENST00000606318 124 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 MIR8070-201ENST00000616510 88 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 DUXAP9-208ENST00000622815 614 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 snoZ196.1-201ENST00000625269 89 ntBASIC2.17□□□□□ -2.06
NPHP1O15259 RNU6-280P-201ENST00000364145 104 ntBASIC2.16□□□□□ -2.06
NPHP1O15259 RNU6-1019P-201ENST00000364424 107 ntBASIC2.16□□□□□ -2.06
NPHP1O15259 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPHP1O15259 MIR10B-201ENST00000385011 110 ntBASIC2.16□□□□□ -2.06
NPHP1O15259 USMG5P1-201ENST00000425964 177 ntBASIC2.16□□□□□ -2.06
NPHP1O15259 AC107399.1-201ENST00000451226 265 ntBASIC2.16□□□□□ -2.06
NPHP1O15259 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.16□□□□□ -2.06
NPHP1O15259 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP1O15259 AL355802.3-201ENST00000607571 545 ntBASIC2.16□□□□□ -2.06
NPHP1O15259 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.16□□□□□ -2.06
NPHP1O15259 AC006026.1-201ENST00000444025 1803 ntBASIC2.15□□□□□ -2.06
NPHP1O15259 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.15□□□□□ -2.07
NPHP1O15259 snoU2-30.2-201ENST00000362805 70 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 Y_RNA.279-201ENST00000364763 95 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 RNU6-767P-201ENST00000384132 107 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 MIR520A-201ENST00000384862 85 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 MIR499A-201ENST00000384903 122 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NPHP1O15259 MTND3P23-201ENST00000431980 347 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.15□□□□□ -2.07
NPHP1O15259 RNU6-221P-201ENST00000459541 99 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 AC091179.3-201ENST00000474761 144 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.15□□□□□ -2.07
NPHP1O15259 Y_RNA.670-201ENST00000516255 105 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 RNA5SP437-201ENST00000517249 129 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 AC084364.2-201ENST00000546924 395 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 MIR5701-3-201ENST00000578890 82 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 MIR5701-1-201ENST00000585138 82 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 MIR5701-2-201ENST00000615634 82 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 AC006001.4-201ENST00000622243 395 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
NPHP1O15259 AC010615.1-201ENST00000594254 1764 ntBASIC2.15□□□□□ -2.07
NPHP1O15259 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.15□□□□□ -2.07
NPHP1O15259 Y_RNA.160-201ENST00000363677 92 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 RNU5F-3P-201ENST00000363767 117 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 Y_RNA.184-201ENST00000363884 108 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 SNORA63D-201ENST00000364359 132 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 SNORD87-201ENST00000364849 89 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 RNU6-601P-201ENST00000384540 107 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 MIR30A-201ENST00000385092 71 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 MIR548B-201ENST00000385247 97 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NPHP1O15259 RNU6-1050P-201ENST00000410388 107 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 AC016909.1-201ENST00000415916 166 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 HMGN2P34-201ENST00000437647 269 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 AC112492.4-201ENST00000456549 352 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.14□□□□□ -2.07
NPHP1O15259 AC008834.1-201ENST00000511612 175 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 RNU7-30P-201ENST00000516835 62 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.14□□□□□ -2.07
NPHP1O15259 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHP1O15259 AK6P2-201ENST00000549020 471 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 MIR4419B-201ENST00000577260 68 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 AC100812.1-201ENST00000607622 580 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 AC005014.2-201ENST00000607795 599 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.14□□□□□ -2.07
NPHP1O15259 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
NPHP1O15259 Y_RNA.88-201ENST00000363029 99 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 RNU6-727P-201ENST00000363592 107 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 Y_RNA.415-201ENST00000384012 112 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 RNU6-793P-201ENST00000384233 104 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 RNU1-139P-201ENST00000391307 165 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 RPL37P10-201ENST00000412884 288 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.13□□□□□ -2.07
NPHP1O15259 AC007098.1-201ENST00000420122 367 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.13□□□□□ -2.07
NPHP1O15259 AC009474.2-201ENST00000451383 136 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 NDUFB4P10-201ENST00000452541 359 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.13□□□□□ -2.07
NPHP1O15259 RNU7-95P-201ENST00000459222 64 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 Y_RNA.706-201ENST00000516933 99 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 Y_RNA.708-201ENST00000516950 96 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 SNORA44.1-201ENST00000517031 108 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 AC025647.1-201ENST00000517879 253 ntBASIC2.13□□□□□ -2.07
NPHP1O15259 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.13□□□□□ -2.07
NPHP1O15259 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.13□□□□□ -2.07
NPHP1O15259 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.13□□□□□ -2.07
NPHP1O15259 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.13□□□□□ -2.07
NPHP1O15259 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPHP1O15259 MIR424-201ENST00000362227 98 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 Y_RNA.2-201ENST00000362330 96 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 RNU6-845P-201ENST00000362578 103 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 Y_RNA.287-201ENST00000364853 94 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 Y_RNA.482-201ENST00000384377 111 ntBASIC2.12□□□□□ -2.07
NPHP1O15259 MT-TL1-201ENST00000386347 75 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms