Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RNA5SP54-201ENST00000516951 92 ntBASIC1.71□□□□□ -2.14
E2F3O00716 SNORA44.1-201ENST00000517031 108 ntBASIC1.71□□□□□ -2.14
E2F3O00716 RNU6-264P-201ENST00000517134 104 ntBASIC1.71□□□□□ -2.14
E2F3O00716 AC134698.4-201ENST00000523451 826 ntBASIC1.71□□□□□ -2.14
E2F3O00716 AC026470.2-201ENST00000561492 181 ntBASIC1.71□□□□□ -2.14
E2F3O00716 MIR3169-201ENST00000578032 83 ntBASIC1.71□□□□□ -2.14
E2F3O00716 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.71□□□□□ -2.14
E2F3O00716 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
E2F3O00716 MIR4781-201ENST00000585250 76 ntBASIC1.71□□□□□ -2.14
E2F3O00716 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.71□□□□□ -2.14
E2F3O00716 AC084768.2-201ENST00000622736 221 ntBASIC1.71□□□□□ -2.14
E2F3O00716 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.71□□□□□ -2.14
E2F3O00716 MTND4LP32-201ENST00000636111 270 ntBASIC1.71□□□□□ -2.14
E2F3O00716 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.71□□□□□ -2.14
E2F3O00716 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
E2F3O00716 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
E2F3O00716 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
E2F3O00716 MIR378A-201ENST00000362177 66 ntBASIC1.7□□□□□ -2.14
E2F3O00716 U8.10-201ENST00000384260 133 ntBASIC1.7□□□□□ -2.14
E2F3O00716 RNU6-310P-201ENST00000384655 107 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AL627390.1-201ENST00000396055 340 ntBASIC1.7□□□□□ -2.14
E2F3O00716 MTCYBP4-201ENST00000401524 249 ntBASIC1.7□□□□□ -2.14
E2F3O00716 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
E2F3O00716 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
E2F3O00716 Y_RNA.646-201ENST00000410980 101 ntBASIC1.7□□□□□ -2.14
E2F3O00716 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.7□□□□□ -2.14
E2F3O00716 MTCO3P29-201ENST00000432119 779 ntBASIC1.7□□□□□ -2.14
E2F3O00716 MTCO3P8-201ENST00000453691 755 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AC007215.1-201ENST00000464893 276 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AC097473.1-201ENST00000508142 408 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.7□□□□□ -2.14
E2F3O00716 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AC104581.2-201ENST00000572227 430 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AC010900.2-201ENST00000604508 210 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AL355802.3-201ENST00000607571 545 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AC100812.1-201ENST00000607622 580 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AC005014.2-201ENST00000607795 599 ntBASIC1.7□□□□□ -2.14
E2F3O00716 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
E2F3O00716 TCL6_2.1-201ENST00000615162 119 ntBASIC1.7□□□□□ -2.14
E2F3O00716 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AC084781.2-201ENST00000615568 161 ntBASIC1.7□□□□□ -2.14
E2F3O00716 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
E2F3O00716 AC112487.2-201ENST00000637950 304 ntBASIC1.7□□□□□ -2.14
E2F3O00716 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
E2F3O00716 RNU6-661P-201ENST00000362409 107 ntBASIC1.69□□□□□ -2.14
E2F3O00716 Y_RNA.67-201ENST00000362870 100 ntBASIC1.69□□□□□ -2.14
E2F3O00716 RNU6-867P-201ENST00000364956 107 ntBASIC1.69□□□□□ -2.14
E2F3O00716 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.69□□□□□ -2.14
E2F3O00716 RNU6-17P-201ENST00000384245 107 ntBASIC1.69□□□□□ -2.14
E2F3O00716 RNU6-18P-201ENST00000384527 107 ntBASIC1.69□□□□□ -2.14
E2F3O00716 RNU6-321P-201ENST00000410912 106 ntBASIC1.69□□□□□ -2.14
E2F3O00716 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.69□□□□□ -2.14
E2F3O00716 AL445305.1-201ENST00000432577 575 ntBASIC1.69□□□□□ -2.14
E2F3O00716 SNRPEP8-201ENST00000442866 260 ntBASIC1.69□□□□□ -2.14
E2F3O00716 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.69□□□□□ -2.14
E2F3O00716 RNU7-87P-201ENST00000459343 62 ntBASIC1.69□□□□□ -2.14
E2F3O00716 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.69□□□□□ -2.14
E2F3O00716 FGF7P4-201ENST00000509595 295 ntBASIC1.69□□□□□ -2.14
E2F3O00716 ATP5EP1-201ENST00000510257 156 ntBASIC1.69□□□□□ -2.14
E2F3O00716 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
E2F3O00716 RNU6-58P-201ENST00000517143 103 ntBASIC1.69□□□□□ -2.14
E2F3O00716 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.69□□□□□ -2.14
E2F3O00716 AC133104.2-201ENST00000615272 193 ntBASIC1.69□□□□□ -2.14
E2F3O00716 BX322639.1-202ENST00000423987 2213 ntBASIC1.68□□□□□ -2.14
E2F3O00716 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
E2F3O00716 MIR30A-201ENST00000385092 71 ntBASIC1.68□□□□□ -2.14
E2F3O00716 MT-TD-201ENST00000387419 68 ntBASIC1.68□□□□□ -2.14
E2F3O00716 AC007098.1-201ENST00000420122 367 ntBASIC1.68□□□□□ -2.14
E2F3O00716 MTCO2P27-201ENST00000420740 428 ntBASIC1.68□□□□□ -2.14
E2F3O00716 MTCYBP10-201ENST00000424905 650 ntBASIC1.68□□□□□ -2.14
E2F3O00716 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
E2F3O00716 AC092423.1-201ENST00000430165 186 ntBASIC1.68□□□□□ -2.14
E2F3O00716 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.68□□□□□ -2.14
E2F3O00716 Y_RNA.632-201ENST00000459189 102 ntBASIC1.68□□□□□ -2.14
E2F3O00716 RPL17P19-201ENST00000489069 552 ntBASIC1.68□□□□□ -2.14
E2F3O00716 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.68□□□□□ -2.14
E2F3O00716 Y_RNA.675-201ENST00000516389 149 ntBASIC1.68□□□□□ -2.14
E2F3O00716 SNORA25.14-201ENST00000516481 132 ntBASIC1.68□□□□□ -2.14
E2F3O00716 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
E2F3O00716 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.68□□□□□ -2.14
E2F3O00716 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.68□□□□□ -2.14
E2F3O00716 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.68□□□□□ -2.14
E2F3O00716 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.68□□□□□ -2.14
E2F3O00716 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
E2F3O00716 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
E2F3O00716 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
E2F3O00716 LINC02555-201ENST00000563933 1951 ntBASIC1.67□□□□□ -2.14
E2F3O00716 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
E2F3O00716 RNU6-545P-201ENST00000362681 104 ntBASIC1.67□□□□□ -2.14
E2F3O00716 Y_RNA.58-201ENST00000362807 102 ntBASIC1.67□□□□□ -2.14
E2F3O00716 RNU1-76P-201ENST00000362903 159 ntBASIC1.67□□□□□ -2.14
E2F3O00716 Y_RNA.106-201ENST00000363189 100 ntBASIC1.67□□□□□ -2.14
E2F3O00716 Y_RNA.132-201ENST00000363421 102 ntBASIC1.67□□□□□ -2.14
E2F3O00716 Y_RNA.154-201ENST00000363624 102 ntBASIC1.67□□□□□ -2.14
E2F3O00716 RNU5E-4P-201ENST00000364931 120 ntBASIC1.67□□□□□ -2.14
E2F3O00716 SNORD31B-201ENST00000364977 69 ntBASIC1.67□□□□□ -2.14
E2F3O00716 RNY3P1-201ENST00000365085 102 ntBASIC1.67□□□□□ -2.14
E2F3O00716 Y_RNA.332-201ENST00000365271 113 ntBASIC1.67□□□□□ -2.14
E2F3O00716 RNY3-201ENST00000365484 102 ntBASIC1.67□□□□□ -2.14
E2F3O00716 MIR190B-201ENST00000401119 79 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 233.6 ms