Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.73□□□□□ -2.13
CCDC188H7C350 RNU6-222P-201ENST00000362438 107 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 SNORA72.2-201ENST00000365028 127 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 Y_RNA.415-201ENST00000384012 112 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 RNU6-417P-201ENST00000384712 107 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 RNU6-159P-201ENST00000391080 106 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC188H7C350 MIR1267-201ENST00000408723 78 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 RPS20P15-201ENST00000412792 311 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC188H7C350 CST2P1-201ENST00000425770 87 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 MTND1P2-201ENST00000430604 821 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 RPL31P58-201ENST00000469001 379 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.73□□□□□ -2.13
CCDC188H7C350 AC025465.3-201ENST00000510570 311 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 AC046134.1-201ENST00000514454 666 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 RNU6-307P-201ENST00000516743 106 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC188H7C350 MIR3198-2-201ENST00000577868 80 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 AC016727.1-205ENST00000605437 569 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 AC010999.1-201ENST00000611856 324 ntBASIC1.73□□□□□ -2.13
CCDC188H7C350 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC188H7C350 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC188H7C350 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CCDC188H7C350 AL356292.1-201ENST00000283110 373 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 RNU6-661P-201ENST00000362409 107 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 Y_RNA.599-201ENST00000410489 109 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC188H7C350 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC188H7C350 AC091179.3-201ENST00000474761 144 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 RPL7P42-201ENST00000481005 679 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 AC103851.1-201ENST00000506833 274 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 AC026782.1-201ENST00000512952 449 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC188H7C350 RNU6-1114P-201ENST00000516022 107 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC188H7C350 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC188H7C350 MIR8074-201ENST00000615081 81 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.72□□□□□ -2.13
CCDC188H7C350 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC188H7C350 HSPE1P21-201ENST00000438283 308 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 HSPE1P9-201ENST00000440046 311 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 AC007677.1-201ENST00000445757 515 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC188H7C350 RPL23AP63-201ENST00000498752 471 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 Y_RNA.670-201ENST00000516255 105 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 AC084364.2-201ENST00000546924 395 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC188H7C350 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC188H7C350 AC010900.2-201ENST00000604508 210 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 AL353149.1-201ENST00000610667 244 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 MIR338-201ENST00000636369 67 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 AC099654.5-201ENST00000636479 350 ntBASIC1.71□□□□□ -2.14
CCDC188H7C350 MIR424-201ENST00000362227 98 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 RNY1P16-201ENST00000363063 111 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 Y_RNA.106-201ENST00000363189 100 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 U3.8-201ENST00000363675 217 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 Y_RNA.482-201ENST00000384377 111 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 MIR515-2-201ENST00000384883 83 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 MIR515-1-201ENST00000384884 83 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 AC092423.1-201ENST00000430165 186 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 MTND3P10-201ENST00000450967 341 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC188H7C350 AC008834.1-201ENST00000511612 175 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 AC093023.1-201ENST00000547375 507 ntBASIC1.7□□□□□ -2.14
CCDC188H7C350 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC188H7C350 MTND5P16-201ENST00000460269 1703 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC188H7C350 Y_RNA.88-201ENST00000363029 99 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 Y_RNA.184-201ENST00000363884 108 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 RNU6-1240P-201ENST00000365155 104 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 MIR10B-201ENST00000385011 110 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 MT-TL1-201ENST00000386347 75 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 COX6CP10-201ENST00000416832 224 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 MTCYBP10-201ENST00000424905 650 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 FTH1P12-201ENST00000432137 551 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC188H7C350 snoU13.9-201ENST00000458927 103 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 Y_RNA.635-201ENST00000459041 101 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC188H7C350 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.69□□□□□ -2.14
CCDC188H7C350 Y_RNA.683-201ENST00000516508 93 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 APOOP3-201ENST00000536787 586 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 AC005899.2-201ENST00000584353 90 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.69□□□□□ -2.14
CCDC188H7C350 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC188H7C350 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
CCDC188H7C350 AC100821.1-201ENST00000523153 2479 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
CCDC188H7C350 RNU6-845P-201ENST00000362578 103 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 SNORA67.2-201ENST00000384300 149 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 RNU6-296P-201ENST00000384608 107 ntBASIC1.68□□□□□ -2.14
CCDC188H7C350 MIR548B-201ENST00000385247 97 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms