Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.86□□□□□ -2.27
SMKR1H3BMG3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.86□□□□□ -2.27
SMKR1H3BMG3 PIGPP4-201ENST00000584447 307 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.86□□□□□ -2.27
SMKR1H3BMG3 AC009248.2-201ENST00000619826 254 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SMKR1H3BMG3 RNU6-1252P-201ENST00000363054 104 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 RNU4-76P-201ENST00000364509 141 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 RNU6-483P-201ENST00000384088 108 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 RNU6-793P-201ENST00000384233 104 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 RNU6-17P-201ENST00000384245 107 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 RNU6-505P-201ENST00000384427 107 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 RNU6-18P-201ENST00000384527 107 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 Y_RNA.530-201ENST00000384587 101 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 MIR222-201ENST00000384992 110 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 MIR660-201ENST00000385235 97 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 SNORA12.1-201ENST00000390873 148 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 SNORA40.6-201ENST00000391153 128 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.85□□□□□ -2.27
SMKR1H3BMG3 ZNF885P-201ENST00000420174 1098 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 MTATP6P17-201ENST00000431030 672 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.85□□□□□ -2.27
SMKR1H3BMG3 MTCO3P18-201ENST00000440206 761 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 HSPE1P13-201ENST00000451143 297 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 AC091179.3-201ENST00000474761 144 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 7SK.7-201ENST00000603504 247 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 AC019193.3-201ENST00000609144 554 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 AC012676.2-201ENST00000619258 186 ntBASIC0.85□□□□□ -2.27
SMKR1H3BMG3 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 RNU6-908P-201ENST00000410160 94 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 RPL30P16-201ENST00000419341 429 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.84□□□□□ -2.27
SMKR1H3BMG3 AL591704.2-201ENST00000421658 181 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 AL445305.1-201ENST00000432577 575 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.84□□□□□ -2.27
SMKR1H3BMG3 HMGN2P26-201ENST00000463169 339 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 RPL30P10-201ENST00000488148 337 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 SNORA31.4-201ENST00000516049 129 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 RNU6-256P-201ENST00000516747 97 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.84□□□□□ -2.27
SMKR1H3BMG3 APOOP3-201ENST00000536787 586 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 UBL5P4-201ENST00000562584 236 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 MIR4513-201ENST00000581077 86 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 NBR2-204ENST00000587322 63 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 AC124303.1-201ENST00000605703 360 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 MIR6852-201ENST00000621699 66 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 AC106754.2-201ENST00000623006 233 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.84□□□□□ -2.27
SMKR1H3BMG3 SCARNA15.3-201ENST00000626315 122 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 SCARNA4.1-201ENST00000628597 123 ntBASIC0.84□□□□□ -2.27
SMKR1H3BMG3 ZNF209P-201ENST00000593450 2304 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AC018630.2-201ENST00000534866 2403 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AP000568.1-201ENST00000282964 442 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.179-201ENST00000363844 90 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SMKR1H3BMG3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.83□□□□□ -2.28
SMKR1H3BMG3 MTND4P18-201ENST00000447010 465 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AC098826.2-201ENST00000452011 651 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.83□□□□□ -2.28
SMKR1H3BMG3 SNORD65B-201ENST00000459126 73 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 RNU7-66P-201ENST00000459469 62 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.83□□□□□ -2.28
SMKR1H3BMG3 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AC116337.1-201ENST00000509680 687 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AC093303.1-201ENST00000514549 295 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 SNORA31.2-201ENST00000516019 134 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 RNU6-922P-201ENST00000516753 99 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.704-201ENST00000516851 102 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 MIR5696-201ENST00000578474 85 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 MIR4438-201ENST00000585271 93 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 SNORA28-201ENST00000606769 126 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AC006435.5-201ENST00000624486 112 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.83□□□□□ -2.28
SMKR1H3BMG3 AC068137.4-201ENST00000638485 296 ntBASIC0.83□□□□□ -2.28
SMKR1H3BMG3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 RNU4-79P-201ENST00000362764 141 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.100-201ENST00000363141 102 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.135-201ENST00000363439 95 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 Y_RNA.256-201ENST00000364594 104 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 SNORA70B-201ENST00000384210 135 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 MIR19B1-201ENST00000384829 87 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 MIR653-201ENST00000385279 96 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 RNU6-780P-201ENST00000391030 104 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 MRPL35P3-201ENST00000421557 364 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 AC105758.1-201ENST00000506038 399 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 AC134698.4-201ENST00000523451 826 ntBASIC0.82□□□□□ -2.28
SMKR1H3BMG3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.82□□□□□ -2.28
SMKR1H3BMG3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms