Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MTND4P12-201ENST00000498999 1377 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 MTND5P10-201ENST00000603719 1809 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 RNY1P10-201ENST00000363268 113 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.132-201ENST00000363421 102 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-1305P-201ENST00000364353 104 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.248-201ENST00000364501 109 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-596P-201ENST00000365395 98 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-1013P-201ENST00000384180 107 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-17P-201ENST00000384245 107 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-975P-201ENST00000384296 105 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-18P-201ENST00000384527 107 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 MIR586-201ENST00000385035 97 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 MIR548K-201ENST00000408406 116 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 MTND3P8-201ENST00000412909 339 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 AC016909.1-201ENST00000415916 166 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 AC011406.1-201ENST00000512440 370 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.676-201ENST00000516393 96 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 RNU1-54P-201ENST00000517181 120 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 MIR4285-201ENST00000581001 85 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 AC126177.8-201ENST00000618339 1015 ntBASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-222P-201ENST00000362438 107 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 RNU6-595P-201ENST00000363944 107 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 RNU4-42P-201ENST00000364738 142 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 Y_RNA.339-201ENST00000365325 102 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 RNU6-1235P-201ENST00000384559 107 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 MIR153-2-201ENST00000385225 87 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 RPL21P111-201ENST00000418453 477 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 RPS3AP52-201ENST00000435639 297 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 RNU6-498P-201ENST00000459468 107 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 AP000870.1-201ENST00000472927 406 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 AC091179.3-201ENST00000474761 144 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 RNA5SP384-201ENST00000516615 116 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 RNU6-344P-201ENST00000516635 111 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 RNU6-1016P-201ENST00000516689 94 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 SNRPGP20-201ENST00000604477 205 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 AC018462.2-201ENST00000605375 395 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 AL353149.1-201ENST00000610667 244 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 ZNF299P-201ENST00000406845 1804 ntBASIC1.4□□□□□ -2.19
SMIM28A0A1B0GU29 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 RNU6-727P-201ENST00000363592 107 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 SNORD87-201ENST00000364849 89 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 Y_RNA.415-201ENST00000384012 112 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 MIR30A-201ENST00000385092 71 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 AL139396.1-201ENST00000421137 167 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 MTND3P23-201ENST00000431980 347 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 HMGN2P34-201ENST00000437647 269 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 RPS29P29-201ENST00000456396 171 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 AC005908.1-201ENST00000468701 347 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 Y_RNA.670-201ENST00000516255 105 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 RNU2-34P-201ENST00000516534 121 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 AC069114.2-201ENST00000604699 304 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 AC005014.2-201ENST00000607795 599 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 AC092794.1-201ENST00000612734 582 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 AC006001.4-201ENST00000622243 395 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 MIR338-201ENST00000636369 67 ntBASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.39□□□□□ -2.19
SMIM28A0A1B0GU29 AC245060.5-201ENST00000610778 3293 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 CASC19-280ENST00000642102 1351 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 MIR337-201ENST00000362281 93 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 Y_RNA.72-201ENST00000362894 103 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 RNU1-96P-201ENST00000364163 162 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 Y_RNA.405-201ENST00000383979 100 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 Y_RNA.451-201ENST00000384200 100 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 Y_RNA.524-201ENST00000384564 100 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 Y_RNA.561-201ENST00000384694 100 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 MIR10B-201ENST00000385011 110 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 MIR548B-201ENST00000385247 97 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 RNU6-159P-201ENST00000391080 106 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 Y_RNA.594-201ENST00000410373 140 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 RNU6-57P-201ENST00000411348 103 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 RPS20P15-201ENST00000412792 311 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 NCOR1P3-201ENST00000420479 303 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 MTND1P2-201ENST00000430604 821 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 MTND4P17-201ENST00000470444 350 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 SNORA25.14-201ENST00000516481 132 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 RNA5SP54-201ENST00000516951 92 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 AL590705.4-201ENST00000532209 134 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 AL355802.3-201ENST00000607571 545 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 SNORD11B-201ENST00000607707 90 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 AL078596.1-201ENST00000624856 447 ntBASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.38□□□□□ -2.19
SMIM28A0A1B0GU29 MIR424-201ENST00000362227 98 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms