Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC074290.1-201ENST00000448883 135 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU7-57P-201ENST00000459540 60 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC027575.1-201ENST00000481064 460 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU6-976P-201ENST00000516086 111 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 CYCSP23-201ENST00000519781 313 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC144568.1-201ENST00000520139 137 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 MIR4672-201ENST00000583126 81 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC005786.1-201ENST00000588553 154 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AL162373.1-201ENST00000620433 407 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 MIR219B-201ENST00000637023 88 ntBASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRBV4-1A0A0J9YWV2 CENPCP1-201ENST00000533085 2578 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU6-1301P-201ENST00000362724 104 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU6-797P-201ENST00000363101 109 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.197-201ENST00000364004 102 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 SNORD42.2-201ENST00000365570 69 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.395-201ENST00000383945 109 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.535-201ENST00000384612 99 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC018865.2-201ENST00000423631 129 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU6-221P-201ENST00000459541 99 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU6-911P-201ENST00000516523 104 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC022868.1-201ENST00000517767 391 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AP005660.1-201ENST00000522972 293 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AP002770.2-201ENST00000543613 532 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 MIR1273D-201ENST00000577266 86 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 MIR4287-201ENST00000579398 78 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AL080274.1-201ENST00000605565 220 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AL357075.2-201ENST00000614906 189 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 snoZ196.1-201ENST00000625269 89 ntBASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TRBV4-1A0A0J9YWV2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC008555.8-201ENST00000623602 2168 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AL159152.1-201ENST00000635019 2587 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.112-201ENST00000363250 102 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU6-879P-201ENST00000364328 108 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.314-201ENST00000365114 102 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU1-115P-201ENST00000365329 160 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.419-201ENST00000384041 102 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.428-201ENST00000384078 102 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 MIR1185-2-201ENST00000408687 86 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.595-201ENST00000410403 105 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC060773.1-201ENST00000421698 310 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC007677.1-201ENST00000445757 515 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 CHEK2P4-201ENST00000450340 246 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RPL23AP3-201ENST00000453844 468 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 Y_RNA.639-201ENST00000458981 102 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU6-1170P-201ENST00000515974 106 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 SNORD116.3-201ENST00000517176 78 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC091144.1-201ENST00000519573 138 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AC008749.1-201ENST00000597650 306 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 AL353149.1-201ENST00000610667 244 ntBASIC1.72□□□□□ -2.13
TRBV4-1A0A0J9YWV2 RNU4-82P-201ENST00000362443 140 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 RNY3P11-201ENST00000364153 102 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 SNORA48.1-201ENST00000390879 135 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 RNA5SP501-201ENST00000410990 112 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 ELOCP21-201ENST00000412558 336 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AL137792.2-201ENST00000443484 235 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AC074133.1-201ENST00000515696 183 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AL442163.3-201ENST00000554110 156 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AC013412.1-201ENST00000610687 192 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 U2.1-201ENST00000618978 145 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AL160413.1-201ENST00000622780 310 ntBASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AC006026.1-201ENST00000444025 1803 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 ZNF702P-202ENST00000434269 1966 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 MIR410-201ENST00000362222 80 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 Y_RNA.460-201ENST00000384255 102 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 RNY3P4-201ENST00000384428 101 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 Y_RNA.510-201ENST00000384511 114 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 MIR676-201ENST00000390702 67 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AL512604.1-201ENST00000404812 257 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AL117342.1-201ENST00000404861 406 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 Y_RNA.605-201ENST00000410577 105 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 RNU6-57P-201ENST00000411348 103 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AC016909.1-201ENST00000415916 166 ntBASIC1.7□□□□□ -2.14
TRBV4-1A0A0J9YWV2 AL158823.1-201ENST00000418441 478 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms