Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Mir5126-201ENSMUST00000175513 77 ntBASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h3Q9Z0Y9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm12497-201ENSMUST00000138778 237 ntBASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm7230-201ENSMUST00000173026 815 ntBASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm8000-201ENSMUST00000188378 592 ntBASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h3Q9Z0Y9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm13418-201ENSMUST00000119097 944 ntBASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm5364-201ENSMUST00000216789 889 ntBASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h3Q9Z0Y9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h3Q9Z0Y9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Nr1h3Q9Z0Y9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nr1h3Q9Z0Y9 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.39■□□□□ 0.38
Nr1h3Q9Z0Y9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Nr1h3Q9Z0Y9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.39■□□□□ 0.37
Nr1h3Q9Z0Y9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms