Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Gm44450-201ENSMUST00000199528 114 ntBASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a2Q9JLR1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 AA414768-201ENSMUST00000121924 1257 ntBASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a2Q9JLR1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Gm6345-202ENSMUST00000180900 204 ntBASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sec61a2Q9JLR1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms