Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Gm10653-202ENSMUST00000139570 835 ntBASIC14.81□□□□□ -0.04
Dap3Q9ER88 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Dap3Q9ER88 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.8□□□□□ -0.04
Dap3Q9ER88 Gm12085-201ENSMUST00000119263 940 ntBASIC14.8□□□□□ -0.04
Dap3Q9ER88 Gm13168-201ENSMUST00000121771 632 ntBASIC14.8□□□□□ -0.04
Dap3Q9ER88 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.8□□□□□ -0.04
Dap3Q9ER88 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dap3Q9ER88 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Mir1199-201ENSMUST00000117015 119 ntBASIC14.79□□□□□ -0.04
Dap3Q9ER88 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Gm38027-201ENSMUST00000192315 235 ntBASIC14.79□□□□□ -0.04
Dap3Q9ER88 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Dap3Q9ER88 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.78□□□□□ -0.04
Dap3Q9ER88 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.78□□□□□ -0.04
Dap3Q9ER88 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.78□□□□□ -0.04
Dap3Q9ER88 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.78□□□□□ -0.04
Dap3Q9ER88 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dap3Q9ER88 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms