Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rrp8Q9DB85 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Mir6404-201ENSMUST00000183699 94 ntBASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Gm18622-201ENSMUST00000219361 595 ntBASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rrp8Q9DB85 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm4995-201ENSMUST00000117247 432 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm8825-201ENSMUST00000182565 998 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm4518-201ENSMUST00000182638 718 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rrp8Q9DB85 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Mir3113-201ENSMUST00000175478 76 ntBASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms