Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Gm13534-201ENSMUST00000121169 513 ntBASIC13.96□□□□□ -0.17
Mbd3l1Q9D9H3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.96□□□□□ -0.17
Mbd3l1Q9D9H3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mbd3l1Q9D9H3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mbd3l1Q9D9H3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Mbd3l1Q9D9H3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mbd3l1Q9D9H3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mbd3l1Q9D9H3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mbd3l1Q9D9H3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mbd3l1Q9D9H3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mbd3l1Q9D9H3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.96□□□□□ -0.18
Mbd3l1Q9D9H3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.96□□□□□ -0.18
Mbd3l1Q9D9H3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mbd3l1Q9D9H3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mbd3l1Q9D9H3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mbd3l1Q9D9H3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mbd3l1Q9D9H3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mbd3l1Q9D9H3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mbd3l1Q9D9H3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mbd3l1Q9D9H3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms