Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm3404Q9D506 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3404Q9D506 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3404Q9D506 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3404Q9D506 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Gm3404Q9D506 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Gm3404Q9D506 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3404Q9D506 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.08■□□□□ 0.32
Gm3404Q9D506 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm3404Q9D506 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3404Q9D506 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3404Q9D506 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm3404Q9D506 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.05■□□□□ 0.32
Gm3404Q9D506 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3404Q9D506 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms